Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_21710 and AO353_21715 are separated by 52 nucleotidesAO353_21715 and AO353_21720 are separated by 10 nucleotidesAO353_21720 and AO353_21725 overlap by 4 nucleotidesAO353_21725 and AO353_21730 are separated by 29 nucleotides AO353_21710: AO353_21710 - ABC transporter for D-glucosamine, periplasmic substrate-binding component (from data), at 4,760,486 to 4,761,334 _21710 AO353_21715: AO353_21715 - ABC transporter for D-glucosamine, permease component 1 (from data), at 4,761,387 to 4,762,049 _21715 AO353_21720: AO353_21720 - ABC transporter for D-glucosamine, permease component 2 (from data), at 4,762,060 to 4,762,722 _21720 AO353_21725: AO353_21725 - ABC transporter for D-glucosamine, ATPase component (from data), at 4,762,719 to 4,763,516 _21725 AO353_21730: AO353_21730 - reactive intermediate/imine deaminase, at 4,763,546 to 4,763,935 _21730
Group Condition AO353_21710 AO353_21715 AO353_21720 AO353_21725 AO353_21730
nitrogen source D-Glucosamine Hydrochloride (N) -3.9 -3.8 -4.1 N.D. N.D.
carbon source D-Glucosamine Hydrochloride (C) -2.1 -2.2 -1.7 N.D. N.D.
motility outer cut, LB soft agar motility assay -0.6 +0.3 -0.6 N.D. N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.0 -0.5 N.D. N.D.
carbon source acetate (C) -0.2 -0.2 -0.3 N.D. N.D.
stress Cisplatin 0.006 mg/ml -0.3 +0.0 -0.4 N.D. N.D.
motility outer cut, LB soft agar motility assay -0.5 -0.3 +0.2 N.D. N.D.
nitrogen source Parabanic Acid (N) -0.1 -0.3 -0.2 N.D. N.D.
carbon source acetate (C) -0.2 -0.4 +0.1 N.D. N.D.
pH Minimal media pH7 -0.4 +0.1 -0.2 N.D. N.D.
carbon source L-Valine (C) +0.1 -0.6 -0.0 N.D. N.D.
nitrogen source L-Lysine (N) -0.2 -0.4 +0.1 N.D. N.D.
lb LB -0.2 +0.1 -0.3 N.D. N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.2 +0.2 -0.4 N.D. N.D.
carbon source L-Serine (C) +0.1 -0.3 -0.2 N.D. N.D.
stress Cobalt chloride 0.32 mM -0.4 -0.0 +0.2 N.D. N.D.
stress Fusidic 0.125 mg/ml -0.2 +0.2 -0.2 N.D. N.D.
carbon source D-Alanine (C) +0.2 -0.5 +0.1 N.D. N.D.
stress Cholin acetate 19 mM +0.2 +0.1 -0.4 N.D. N.D.
carbon source L-Phenylalanine (C) +0.2 +0.1 -0.3 N.D. N.D.
stress Vancomycin 1 mg/ml -0.1 +0.3 -0.3 N.D. N.D.
carbon source D-Serine (C) -0.3 +0.3 +0.2 N.D. N.D.
stress Tetracycline 0.0016 mg/ml +0.3 -0.3 +0.2 N.D. N.D.
carbon source D-Glucose -0.3 +0.1 +0.4 N.D. N.D.
stress Furfuryl Alcohol 0.0625 vol% +0.1 +0.4 -0.1 N.D. N.D.
motility outer cut, LB soft agar motility assay +0.4 -0.1 +0.3 N.D. N.D.
carbon source L-Proline (C) +0.2 +0.2 +0.2 N.D. N.D.
denitrifying Nitrate reduction, replicate B +0.0 +0.4 +0.1 N.D. N.D.
stress Lomefloxacin 0.001 mM +0.2 +0.2 +0.3 N.D. N.D.
stress Furfuryl Alcohol 0.25 vol% +0.1 +0.5 +0.2 N.D. N.D.
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