Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_21370 and AO353_21375 are separated by 212 nucleotidesAO353_21375 and AO353_21380 are separated by 354 nucleotidesAO353_21380 and AO353_21385 are separated by 70 nucleotidesAO353_21385 and AO353_21390 are separated by 176 nucleotides AO353_21370: AO353_21370 - protein iolH, at 4,678,588 to 4,679,448 _21370 AO353_21375: AO353_21375 - oxidoreductase, at 4,679,661 to 4,680,713 _21375 AO353_21380: AO353_21380 - rhizopine-binding protein, at 4,681,068 to 4,681,994 _21380 AO353_21385: AO353_21385 - m-Inositol ABC transporter, ATPase component (itaA) (from data), at 4,682,065 to 4,683,630 _21385 AO353_21390: AO353_21390 - m-Inositol ABC transporter, permease component (iatP) (from data), at 4,683,807 to 4,684,829 _21390
Group Condition AO353_21370 AO353_21375 AO353_21380 AO353_21385 AO353_21390
carbon source m-Inositol (C) -0.5 -0.5 -3.4 -3.6 -3.0
carbon source m-Inositol (C) -0.0 -0.0 -3.1 -3.6 -2.7
anaerobic Anaerobic, acetate donor; nitrate and iron -0.0 -0.1 -0.2 -0.5 -0.7
stress Spectinomycin 0.15 mg/ml +0.0 -0.2 -1.0 -0.1 -0.1
pH Minimal media pH9 -0.1 -0.5 -0.0 +0.0 -0.5
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.4 -0.3 -0.3 +0.0 +0.0
carbon source acetate (C) +0.4 -0.5 -0.4 -0.1 -0.3
stress Rifampicin 0.005 mg/ml +0.1 -0.2 -0.6 -0.3 +0.2
lb LB -0.2 +0.3 -0.5 +0.1 -0.4
carbon source propionate (C) -0.2 -0.0 -0.6 -0.2 +0.3
motility outer cut, LB soft agar motility assay +0.2 -0.1 +0.1 -0.3 -0.4
stress Choline Lysine 12 mM -0.3 +0.0 -0.6 +0.1 +0.1
carbon source L-Ornithine -0.2 -0.5 +0.1 +0.3 -0.3
stress Doxycycline hyclate 0.0002 mg/ml -0.2 +0.1 -0.4 +0.2 -0.3
stress Lomefloxacin 0.001 mM -0.1 +0.4 -0.7 -0.1 +0.1
lb LB -0.4 +0.2 -0.3 -0.1 +0.2
stress Tetracycline 0.0016 mg/ml +0.2 +0.1 -0.6 -0.2 +0.2
stress methylglyoxal 0.008 vol% +0.2 -0.2 -0.5 -0.1 +0.3
carbon source L-Aspartic Acid (C) +0.4 +0.2 -0.7 -0.1 -0.0
motility outer cut, LB soft agar motility assay -0.8 +1.1 +0.0 -0.5 +0.1
survival 4C survival; 672 hrs -0.2 +0.4 -0.4 +0.2 -0.1
pH Minimal media pH9 +0.3 -0.2 -0.1 +0.4 -0.4
denitrifying Nitrate reduction, replicate C -0.3 +0.2 +0.5 -0.3 +0.3
carbon source L-Isoleucine (C) -0.3 +0.2 +0.5 -0.3 +0.3
stress Cisplatin 0.006 mg/ml -0.4 +0.3 +0.3 +0.0 +0.3
carbon source L-Citrulline -0.2 +0.0 -0.2 +0.4 +0.4
nitrogen source Inosine (N) -0.1 +0.4 +0.2 -0.1 +0.4
carbon source L-Ornithine +0.0 +0.4 +0.3 +0.3 -0.1
stress Cisplatin 0.006 mg/ml +0.1 +0.7 -0.3 +0.4 +0.2
stress nitrate 200 mM +0.1 +0.3 +0.1 +0.5 +0.2
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