Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_21140 and AO353_21145 are separated by 5 nucleotidesAO353_21145 and AO353_21150 are separated by 96 nucleotidesAO353_21150 and AO353_21155 are separated by 43 nucleotidesAO353_21155 and AO353_21160 are separated by 144 nucleotides AO353_21140: AO353_21140 - glycosyl hydrolase family 5, at 4,622,116 to 4,624,800 _21140 AO353_21145: AO353_21145 - ligase, at 4,624,806 to 4,626,332 _21145 AO353_21150: AO353_21150 - polysaccharide biosynthesis protein, at 4,626,429 to 4,626,980 _21150 AO353_21155: AO353_21155 - glycosyl transferase, at 4,627,024 to 4,627,740 _21155 AO353_21160: AO353_21160 - transposase, at 4,627,885 to 4,628,172 _21160
Group Condition AO353_21140 AO353_21145 AO353_21150 AO353_21155 AO353_21160
carbon source D-Alanine (C) -0.0 -0.1 N.D. +0.1 -1.2
carbon source propionate (C) -0.0 +0.0 N.D. -0.3 -0.5
stress Lomefloxacin 0.001 mM -0.1 -0.1 N.D. -0.4 -0.1
stress Cisplatin 0.006 mg/ml +0.0 -0.0 N.D. -0.4 -0.3
carbon source Ethanol (C) +0.0 +0.1 N.D. -0.3 -0.5
stress Benzalkonium Chloride 0.01 mg/ml -0.0 +0.0 N.D. +0.2 -0.8
motility outer cut, LB soft agar motility assay -0.0 -0.3 N.D. +0.2 -0.3
stress Chloride 500 mM +0.0 +0.2 N.D. -0.1 -0.4
carbon source L-Citrulline +0.1 -0.2 N.D. -0.3 +0.2
carbon source acetate (C) -0.0 -0.1 N.D. -0.3 +0.2
carbon source L-Citrulline +0.1 -0.1 N.D. -0.4 +0.2
carbon source L-Citrulline -0.1 +0.1 N.D. -0.7 +0.6
pH Minimal media pH9 +0.1 -0.0 N.D. +0.4 -0.4
carbon source D-Glucose -0.1 -0.1 N.D. -0.2 +0.5
carbon source Uridine (C) +0.1 -0.1 N.D. +0.4 -0.3
denitrifying Nitrate reduction, replicate B -0.1 -0.1 N.D. -0.2 +0.7
stress Doxycycline hyclate 0.0006 mg/ml -0.2 +0.2 N.D. +0.1 +0.4
stress Rifampicin 0.005 mg/ml -0.0 +0.2 N.D. -0.1 +0.4
carbon source D-Serine (C) +0.0 -0.1 N.D. +0.1 +0.4
denitrifying Nitrate reduction, replicate C -0.1 -0.1 N.D. +0.1 +0.6
carbon source acetate (C) +0.1 +0.0 N.D. -0.2 +0.6
stress Furfuryl Alcohol 0.0625 vol% -0.0 -0.0 N.D. +0.3 +0.4
nitrogen source L-tyrosine (N) +0.2 +0.1 N.D. +0.1 +0.3
nitrogen source Adenosine (N) +0.1 +0.1 N.D. +0.0 +0.5
motility outer cut, LB soft agar motility assay +0.1 +0.1 N.D. -0.1 +0.6
carbon source Putrescine (C) +0.0 +0.1 N.D. +0.2 +0.6
carbon source L-Alanine (C) +0.1 +0.1 N.D. +0.4 +0.4
carbon source D-Glucose +0.1 +0.0 N.D. +0.1 +0.7
carbon source L-Serine (C) +0.0 +0.1 N.D. +0.1 +0.8
anaerobic Anaerobic, acetate donor; nitrate and iron +0.0 +0.1 N.D. +0.6 +0.8
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