Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_21000 and AO353_21005 are separated by 14 nucleotidesAO353_21005 and AO353_21010 are separated by 87 nucleotidesAO353_21010 and AO353_21015 are separated by 92 nucleotidesAO353_21015 and AO353_21020 overlap by 4 nucleotides AO353_21000: AO353_21000 - quinone oxidoreductase, at 4,590,023 to 4,591,003 _21000 AO353_21005: AO353_21005 - taurine dioxygenase, at 4,591,018 to 4,591,866 _21005 AO353_21010: AO353_21010 - transposase, at 4,591,954 to 4,593,006 _21010 AO353_21015: AO353_21015 - multidrug DMT transporter permease, at 4,593,099 to 4,594,430 _21015 AO353_21020: AO353_21020 - disulfide bond formation protein DsbA, at 4,594,427 to 4,595,092 _21020
Group Condition AO353_21000 AO353_21005 AO353_21010 AO353_21015 AO353_21020
motility outer cut, LB soft agar motility assay -0.2 -0.6 -0.4 -0.4 -0.8
carbon source L-Ornithine -0.3 -0.1 -0.1 -0.3 -0.5
carbon source L-Phenylalanine (C) +0.1 -0.1 -0.7 -0.0 -0.5
carbon source L-Alanine (C) -0.0 +0.2 -0.7 -0.1 -0.5
carbon source L-Ornithine -0.6 +0.0 +0.1 -0.1 -0.5
carbon source pyruvate (C) +0.2 -0.1 -0.2 -0.3 -0.4
carbon source L-Leucine (C) -0.5 +0.2 -0.3 +0.2 -0.4
carbon source D-Glucose +0.1 +0.1 -0.7 +0.1 -0.3
stress Sisomicin 0.008 mg/ml +0.4 -0.2 -0.2 -0.5 -0.1
motility outer cut, LB soft agar motility assay +0.2 -0.1 -0.7 -0.2 +0.3
nitrogen source NAG (N) -0.3 -0.2 +0.2 +0.2 -0.3
nitrogen source D-Serine (N) +0.1 +0.3 -0.2 -0.1 -0.3
stress Cholin acetate 19 mM -0.1 -0.2 -0.0 +0.5 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron -0.6 -0.6 +0.5 +0.3 +0.4
stress Ceftazidime 0.12 mg/ml -0.3 -0.0 -0.4 +0.3 +0.5
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.1 -0.1 -0.3 +0.4 +0.3
nitrogen source Parabanic Acid (N) -0.0 +0.3 +0.4 -0.6 +0.2
stress Choline Lysine 12 mM +0.1 -0.2 -0.3 +0.3 +0.4
motility outer cut, LB soft agar motility assay +0.2 +0.3 -0.1 -0.4 +0.3
stress perchlorate 75 mM +0.1 +0.1 +0.4 +0.2 -0.4
stress Doxycycline hyclate 0.0006 mg/ml -0.1 -0.2 +0.1 +0.3 +0.5
stress Vanillin 1.25 mM -0.1 +0.3 +0.1 -0.2 +0.5
stress Gentamicin 0.006 mg/ml +0.3 +0.1 -0.2 +0.3 +0.2
stress Cobalt chloride 0.32 mM -0.2 +0.0 +0.3 +0.1 +0.5
carbon source L-Isoleucine (C) -0.0 +0.4 +0.6 -0.1 -0.1
stress Cholin acetate 10 mM +0.1 -0.1 -0.1 +0.4 +0.5
stress Thallium(I) acetate 0.016 mg/ml +0.3 -0.0 -0.1 +0.2 +0.5
stress acetate 34 mM +0.0 +0.0 -0.1 +0.5 +0.6
stress Cisplatin 0.006 mg/ml +0.5 +0.1 +0.4 -0.4 +0.5
stress Cisplatin 0.006 mg/ml +0.6 +0.2 +0.1 -0.0 +0.9
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