Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_20835 and AO353_20840 overlap by 4 nucleotidesAO353_20840 and AO353_20845 are separated by 45 nucleotidesAO353_20845 and AO353_20850 are separated by 41 nucleotidesAO353_20850 and AO353_20855 are separated by 128 nucleotides AO353_20835: AO353_20835 - Ribokinase (EC 2.7.1.15) (from data), at 4,562,793 to 4,563,710 _20835 AO353_20840: AO353_20840 - ribose pyranase, at 4,563,707 to 4,564,111 _20840 AO353_20845: AO353_20845 - uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data), at 4,564,157 to 4,565,185 _20845 AO353_20850: AO353_20850 - hypothetical protein, at 4,565,227 to 4,565,430 _20850 AO353_20855: AO353_20855 - hypothetical protein, at 4,565,559 to 4,565,864 _20855
Group Condition AO353_20835 AO353_20840 AO353_20845 AO353_20850 AO353_20855
carbon source Uridine (C) -3.0 -0.3 -0.9 -0.1 -0.2
carbon source propionate (C) -0.6 -1.5 -0.4 -1.6 -0.4
carbon source propionate (C) -0.5 -0.7 +0.1 -2.3 -0.7
carbon source D-Ribose (C) -3.1 +0.2 +0.2 -0.1 -0.0
nitrogen source Adenosine (N) -1.2 -0.5 -1.2 +0.0 -0.0
carbon source D-Ribose (C) -2.9 +0.7 -0.0 -0.2 -0.0
carbon source D-Alanine (C) -0.4 -1.7 +0.0 -0.3 +0.0
carbon source D-Glucose -0.7 -0.7 -0.3 -0.4 -0.1
stress Paraquat dichloride 0.032 mg/mL +0.1 -1.2 -0.5 -0.3 -0.2
stress Doxycycline hyclate 0.0006 mg/ml -0.6 -0.3 -0.6 -0.7 +0.3
carbon source L-Ornithine -0.0 -2.4 +0.3 +0.2 -0.1
carbon source L-Ornithine +0.5 -1.7 +0.2 -0.9 -0.0
stress Cholin acetate 19 mM -0.7 -1.3 +0.4 -0.1 -0.2
stress Cisplatin 0.006 mg/ml -0.6 -0.3 -0.4 +0.2 -0.8
carbon source L-Citrulline +0.4 -1.8 -0.1 -0.2 +0.0
carbon source L-Ornithine -0.1 -1.5 +0.4 -0.2 -0.1
carbon source Cytidine (C) -1.5 +0.4 -0.2 -0.1 -0.2
carbon source acetate (C) +0.2 -1.2 +0.2 -0.2 -0.4
stress Cisplatin 0.006 mg/ml -0.5 +0.8 -0.5 -0.5 -0.4
pH Minimal media pH9 -0.3 -1.2 +0.3 +0.1 +0.3
carbon source L-Citrulline -0.3 +0.5 +0.5 -0.4 -0.6
stress Spectinomycin 0.2 mg/ml +0.0 -1.2 +0.1 +0.3 +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 -1.2 +0.9 +0.3 +0.3
stress Sisomicin 0.008 mg/ml +0.6 -1.4 -0.0 +0.5 +0.6
stress Cobalt chloride 0.16 mM -0.3 +1.0 -0.2 +0.3 -0.4
nitrogen source Parabanic Acid (N) -1.0 +0.6 +0.3 +0.3 +0.2
pH Minimal media pH9 +0.2 +1.5 +0.2 -0.3 +0.0
carbon source L-Citrulline +0.9 +0.7 +0.7 +0.1 +0.3
nitrogen source Gly-Glu (N) +4.0 +1.5 +0.1 +0.2 +0.3
nitrogen source Gly-DL-Asp (N) +5.6 +2.1 +0.2 +0.5 +0.2
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