Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_20775 and AO353_20780 are separated by 188 nucleotidesAO353_20780 and AO353_20785 are separated by 229 nucleotidesAO353_20785 and AO353_20790 are separated by 249 nucleotidesAO353_20790 and AO353_20795 are separated by 14 nucleotides AO353_20775: AO353_20775 - alpha/beta hydrolase, at 4,552,503 to 4,553,204 _20775 AO353_20780: AO353_20780 - hypothetical protein, at 4,553,393 to 4,553,848 _20780 AO353_20785: AO353_20785 - carbon storage regulator CsrA, at 4,554,078 to 4,554,272 _20785 AO353_20790: AO353_20790 - penicillin-binding protein activator LpoB, at 4,554,522 to 4,554,887 _20790 AO353_20795: AO353_20795 - deoxyribonuclease, at 4,554,902 to 4,555,594 _20795
Group Condition AO353_20775 AO353_20780 AO353_20785 AO353_20790 AO353_20795
stress Rifampicin 0.005 mg/ml -0.1 -0.9 -1.9 +0.3 -0.3
survival 4C survival; 672 hrs -0.4 -0.3 -2.1 -0.0 -0.0
stress copper (II) chloride 2.5 mM +0.1 -0.0 -1.7 -0.7 -0.3
stress Lomefloxacin 0.001 mM +0.0 +0.0 -1.6 -0.4 -0.6
motility outer cut, LB soft agar motility assay +0.1 -0.1 -2.3 -0.2 -0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.2 -0.7 -1.0 -0.4 +0.1
carbon source L-Citrulline -0.1 -0.5 -0.6 -0.3 -0.5
carbon source acetate (C) +0.0 -0.1 -1.3 -0.4 -0.3
nitrogen source Gly-Glu (N) -0.1 -0.1 -1.1 -0.4 -0.2
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.1 +0.1 -1.8 -0.6 +0.2
motility outer cut, LB soft agar motility assay -0.2 +0.5 -2.4 +0.3 -0.2
stress Benzalkonium Chloride 0.01 mg/ml -0.2 -0.0 -0.2 -1.2 -0.2
carbon source D-Serine (C) -0.4 +0.2 -0.8 -0.5 -0.2
carbon source L-Alanine (C) +0.2 -0.1 -1.2 -0.4 -0.2
carbon source D,L-Lactate (C) +0.0 -0.0 -0.8 +0.0 -0.9
stress Tetracycline 0.0016 mg/ml -0.3 -0.2 -1.1 +0.4 -0.4
carbon source D-Glucose -0.1 +0.2 -0.8 -0.4 -0.4
carbon source L-Ornithine -0.5 -0.5 -1.6 +1.1 +0.0
carbon source L-Ornithine -0.3 -0.3 -0.9 +0.2 -0.0
nitrogen source Adenosine (N) +0.3 -0.1 -1.1 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.1 -0.4 -1.0 +0.2 -0.1
stress copper (II) chloride 2.5 mM -0.0 +0.3 -1.3 +0.3 -0.3
stress Cisplatin 0.006 mg/ml -0.5 -0.1 -0.1 +0.9 -1.1
stress Nickel (II) chloride 0.625 mM -0.0 +0.1 -1.2 +0.7 -0.3
stress Choline Lysine 12 mM -0.1 -0.5 -0.5 +0.5 -0.2
stress Cisplatin 0.006 mg/ml +0.3 +0.3 -0.9 +0.1 -0.7
carbon source L-Citrulline +0.1 +0.3 -1.3 +0.6 -0.3
denitrifying Nitrate reduction, replicate B +0.1 +0.0 +0.6 -1.3 +0.3
motility outer cut, LB soft agar motility assay -0.6 -0.0 -0.3 +0.9 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 +0.8 +0.3 +0.4 +0.8
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