Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_20120 and AO353_20125 are separated by 29 nucleotidesAO353_20125 and AO353_20130 are separated by 467 nucleotidesAO353_20130 and AO353_20135 are separated by 81 nucleotidesAO353_20135 and AO353_20140 are separated by 911 nucleotides AO353_20120: AO353_20120 - hypothetical protein, at 4,425,675 to 4,425,926 _20120 AO353_20125: AO353_20125 - hypothetical protein, at 4,425,956 to 4,426,705 _20125 AO353_20130: AO353_20130 - hypothetical protein, at 4,427,173 to 4,427,850 _20130 AO353_20135: AO353_20135 - D-alanyl-D-alanine endopeptidase, at 4,427,932 to 4,428,873 _20135 AO353_20140: AO353_20140 - hypothetical protein, at 4,429,785 to 4,430,177 _20140
Group Condition AO353_20120 AO353_20125 AO353_20130 AO353_20135 AO353_20140
motility outer cut, LB soft agar motility assay +0.1 +0.1 -0.7 -0.7 -1.1
stress copper (II) chloride 2.5 mM -1.0 -0.0 -0.2 -0.2 -0.2
motility outer cut, LB soft agar motility assay -1.5 -0.2 -0.6 +0.2 +0.7
carbon source L-Isoleucine (C) +0.4 -0.4 -0.1 -0.2 -0.9
carbon source acetate (C) -1.0 -0.4 +0.7 +0.4 -0.9
carbon source m-Inositol (C) -0.5 -0.3 +0.1 +0.4 -0.4
carbon source L-Citrulline +0.7 +0.0 -0.4 +0.5 -1.4
pH Minimal media pH9 +0.2 -0.2 +0.3 -0.3 -0.6
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.0 +0.4 -0.9
carbon source L-Phenylalanine (C) +0.4 -0.3 -0.2 +0.4 -0.6
stress Doxycycline hyclate 0.0006 mg/ml -1.2 -0.3 +0.9 +0.6 -0.2
denitrifying Nitrate reduction, replicate B -0.6 +0.3 -0.3 -0.1 +0.8
pH Minimal media pH9 +0.2 +0.5 +0.1 -0.4 -0.4
carbon source D-Serine (C) -0.6 -0.2 +0.2 +0.2 +0.5
carbon source casaminos (C) -0.6 -0.2 -0.0 +0.4 +0.5
stress methylglyoxal 0.009 vol% +1.1 -0.3 +0.3 +0.4 -1.4
stress Doxycycline hyclate 0.0002 mg/ml -0.7 -0.1 +0.3 +0.5 +0.2
carbon source propionate (C) +0.4 -0.1 +0.1 +0.7 -0.8
carbon source propionate (C) -1.3 -0.1 +1.0 +0.8 +0.0
carbon source D-Glucose -0.1 -0.6 +0.4 +0.1 +0.8
stress Rifampicin 0.005 mg/ml +0.1 +0.4 +0.5 +0.3 -0.3
stress Spectinomycin 0.2 mg/ml +0.8 -0.1 -0.2 +0.1 +0.4
carbon source L-Citrulline +0.6 -0.6 -0.2 +0.0 +1.1
nitrogen source Glycine (N) +0.6 -0.0 -0.2 +0.3 +0.5
stress Lomefloxacin 0.001 mM +0.5 +0.2 +0.1 +0.6 +0.1
stress Tetracycline 0.0016 mg/ml +0.8 +0.2 +0.5 +0.5 -0.4
stress Spectinomycin 0.15 mg/ml +1.0 +0.2 +0.2 +0.3 +0.2
stress methylglyoxal 0.008 vol% +0.3 +0.3 +0.2 +0.4 +0.7
carbon source L-Ornithine +0.4 +0.3 +0.2 +0.3 +0.8
stress Cisplatin 0.006 mg/ml -0.1 +0.4 +1.1 +0.3 +0.6
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