Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_20120 and AO353_20125 are separated by 29 nucleotides
AO353_20125 and AO353_20130 are separated by 467 nucleotides
AO353_20130 and AO353_20135 are separated by 81 nucleotides
AO353_20135 and AO353_20140 are separated by 911 nucleotides
AO353_20120: AO353_20120 - hypothetical protein, at 4,425,675 to 4,425,926
_20120
AO353_20125: AO353_20125 - hypothetical protein, at 4,425,956 to 4,426,705
_20125
AO353_20130: AO353_20130 - hypothetical protein, at 4,427,173 to 4,427,850
_20130
AO353_20135: AO353_20135 - D-alanyl-D-alanine endopeptidase, at 4,427,932 to 4,428,873
_20135
AO353_20140: AO353_20140 - hypothetical protein, at 4,429,785 to 4,430,177
_20140
Group
Condition
AO353
_20120
AO353
_20125
AO353
_20130
AO353
_20135
AO353
_20140
motility
outer cut, LB soft agar motility assay
+0.1
+0.1
-0.7
-0.7
-1.1
stress
copper (II) chloride 2.5 mM
-1.0
-0.0
-0.2
-0.2
-0.2
motility
outer cut, LB soft agar motility assay
-1.5
-0.2
-0.6
+0.2
+0.7
carbon source
L-Isoleucine (C)
+0.4
-0.4
-0.1
-0.2
-0.9
carbon source
acetate (C)
-1.0
-0.4
+0.7
+0.4
-0.9
carbon source
m-Inositol (C)
-0.5
-0.3
+0.1
+0.4
-0.4
carbon source
L-Citrulline
+0.7
+0.0
-0.4
+0.5
-1.4
pH
Minimal media pH9
+0.2
-0.2
+0.3
-0.3
-0.6
motility
outer cut, LB soft agar motility assay
+0.2
-0.2
+0.0
+0.4
-0.9
carbon source
L-Phenylalanine (C)
+0.4
-0.3
-0.2
+0.4
-0.6
stress
Doxycycline hyclate 0.0006 mg/ml
-1.2
-0.3
+0.9
+0.6
-0.2
denitrifying
Nitrate reduction, replicate B
-0.6
+0.3
-0.3
-0.1
+0.8
pH
Minimal media pH9
+0.2
+0.5
+0.1
-0.4
-0.4
carbon source
D-Serine (C)
-0.6
-0.2
+0.2
+0.2
+0.5
carbon source
casaminos (C)
-0.6
-0.2
-0.0
+0.4
+0.5
stress
methylglyoxal 0.009 vol%
+1.1
-0.3
+0.3
+0.4
-1.4
stress
Doxycycline hyclate 0.0002 mg/ml
-0.7
-0.1
+0.3
+0.5
+0.2
carbon source
propionate (C)
+0.4
-0.1
+0.1
+0.7
-0.8
carbon source
propionate (C)
-1.3
-0.1
+1.0
+0.8
+0.0
carbon source
D-Glucose
-0.1
-0.6
+0.4
+0.1
+0.8
stress
Rifampicin 0.005 mg/ml
+0.1
+0.4
+0.5
+0.3
-0.3
stress
Spectinomycin 0.2 mg/ml
+0.8
-0.1
-0.2
+0.1
+0.4
carbon source
L-Citrulline
+0.6
-0.6
-0.2
+0.0
+1.1
nitrogen source
Glycine (N)
+0.6
-0.0
-0.2
+0.3
+0.5
stress
Lomefloxacin 0.001 mM
+0.5
+0.2
+0.1
+0.6
+0.1
stress
Tetracycline 0.0016 mg/ml
+0.8
+0.2
+0.5
+0.5
-0.4
stress
Spectinomycin 0.15 mg/ml
+1.0
+0.2
+0.2
+0.3
+0.2
stress
methylglyoxal 0.008 vol%
+0.3
+0.3
+0.2
+0.4
+0.7
carbon source
L-Ornithine
+0.4
+0.3
+0.2
+0.3
+0.8
stress
Cisplatin 0.006 mg/ml
-0.1
+0.4
+1.1
+0.3
+0.6
remove
AO353_20120
plot
remove
AO353_20125
plot
remove
AO353_20130
remove
AO353_20135
plot
remove
AO353_20140
plot