Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_20100 and AO353_20105 are separated by 87 nucleotidesAO353_20105 and AO353_20110 are separated by 325 nucleotidesAO353_20110 and AO353_20115 are separated by 4 nucleotidesAO353_20115 and AO353_20120 are separated by 135 nucleotides AO353_20100: AO353_20100 - hypothetical protein, at 4,421,326 to 4,421,835 _20100 AO353_20105: AO353_20105 - serine/threonine protein kinase, at 4,421,923 to 4,423,155 _20105 AO353_20110: AO353_20110 - MFS transporter, at 4,423,481 to 4,424,635 _20110 AO353_20115: AO353_20115 - LysR family transcriptional regulator, at 4,424,640 to 4,425,539 _20115 AO353_20120: AO353_20120 - hypothetical protein, at 4,425,675 to 4,425,926 _20120
Group Condition AO353_20100 AO353_20105 AO353_20110 AO353_20115 AO353_20120
motility outer cut, LB soft agar motility assay -0.4 -0.7 -0.6 +0.6 -1.5
stress Doxycycline hyclate 0.0006 mg/ml +0.7 -0.2 -1.0 -0.9 -1.2
carbon source L-Citrulline -0.5 -0.1 -0.6 -1.7 +0.2
stress acetate 17 mM -0.2 -0.4 -0.3 -0.4 -0.7
nitrogen source Adenosine (N) +0.0 +0.2 -1.3 -0.3 -0.6
stress copper (II) chloride 2.5 mM -0.2 +0.1 +0.1 -0.9 -1.0
anaerobic Anaerobic, acetate donor; nitrate and iron -1.2 +0.3 -0.3 -0.4 -0.3
carbon source D-Serine (C) -0.3 +0.2 -0.4 -0.4 -0.6
carbon source L-Valine (C) -0.2 -1.3 +0.3 +0.4 -0.6
stress Sisomicin 0.008 mg/ml -0.5 +0.2 +0.2 -1.4 +0.2
carbon source Ethanol (C) -0.3 -0.6 -0.1 +0.4 -0.7
carbon source D-Alanine (C) -0.2 -0.4 -0.2 +0.4 -0.7
carbon source acetate (C) +0.1 -0.4 +0.4 -0.1 -1.0
carbon source propionate (C) +0.6 +0.0 +0.0 -0.4 -1.3
stress Cisplatin 0.006 mg/ml -1.1 -0.5 +0.5 +0.3 -0.2
carbon source D-Glucose +0.2 +0.3 +0.1 -1.4 -0.1
motility outer cut, LB soft agar motility assay +0.5 -0.4 -0.1 -0.9 +0.1
stress Tetracycline 0.0016 mg/ml -0.5 +0.0 -0.2 -0.6 +0.8
denitrifying Nitrate reduction, replicate B +0.1 -0.5 +0.5 +0.3 -0.6
carbon source L-Ornithine +0.5 -0.7 -0.1 +0.5 -0.1
carbon source a-Ketoglutaric (C) -0.0 +0.3 +0.3 -0.7 +0.5
carbon source D-Fructose (C) +0.1 -0.5 +0.3 +0.6 -0.3
stress Lomefloxacin 0.001 mM +0.2 -0.8 +0.2 +0.3 +0.5
nitrogen source L-tyrosine (N) -0.5 -0.2 +0.2 +0.3 +0.6
stress Spectinomycin 0.2 mg/ml -0.2 -0.3 -0.2 +0.6 +0.8
stress methylglyoxal 0.009 vol% +0.2 -0.3 -0.4 +0.0 +1.1
denitrifying Nitrate reduction, replicate C -0.6 +0.5 +0.4 +0.4 +0.1
carbon source L-Citrulline -0.5 -0.1 +0.3 +0.6 +0.7
carbon source L-Citrulline +0.1 +0.5 +0.5 +0.2 +0.6
carbon source L-Glutamine (C) +0.2 +0.4 +0.4 +0.8 +0.6
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