Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_19945 and AO353_19950 overlap by 4 nucleotidesAO353_19950 and AO353_19955 overlap by 4 nucleotidesAO353_19955 and AO353_19960 are separated by 52 nucleotidesAO353_19960 and AO353_19965 are separated by 11 nucleotides AO353_19945: AO353_19945 - acetyl-CoA synthetase, at 4,384,784 to 4,386,550 _19945 AO353_19950: AO353_19950 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 4,386,547 to 4,387,530 _19950 AO353_19955: AO353_19955 - pyruvate dehydrogenase, at 4,387,527 to 4,388,507 _19955 AO353_19960: AO353_19960 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 4,388,560 to 4,389,678 _19960 AO353_19965: AO353_19965 - phosphopantetheine-binding protein, at 4,389,690 to 4,389,932 _19965
Group Condition AO353_19945 AO353_19950 AO353_19955 AO353_19960 AO353_19965
stress Doxycycline hyclate 0.0006 mg/ml -0.0 +0.3 -0.6 -0.3 -0.9
carbon source L-Ornithine -0.2 -0.2 -0.1 -0.1 -0.9
carbon source L-Alanine (C) -0.1 -0.5 +0.0 -0.0 -0.7
nitrogen source L-Glutamine (N) -0.2 -0.1 +0.0 -0.5 -0.4
carbon source L-Asparagine (C) -0.2 -0.2 -0.2 +0.0 -0.6
motility outer cut, LB soft agar motility assay -0.2 -0.3 -0.0 -0.3 -0.3
stress Lomefloxacin 0.001 mM -0.2 +0.1 +0.1 -0.4 -0.5
carbon source L-Citrulline +0.2 -0.2 -0.4 -0.1 -0.4
nitrogen source L-Threonine (N) +0.1 -0.0 +0.1 -0.1 -0.7
stress Benzalkonium Chloride 0.012 mg/ml -0.1 +0.2 -0.2 +0.1 -0.5
carbon source acetate (C) +0.2 +0.0 -0.2 +0.0 -0.6
carbon source L-Citrulline +0.1 -0.1 -0.1 +0.3 -0.5
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.2 +0.2 -0.5 +0.0
motility outer cut, LB soft agar motility assay -0.2 -0.4 +0.3 +0.3 -0.3
nitrogen source nitrite (N) -0.0 -0.2 +0.2 +0.3 -0.4
carbon source L-Isoleucine (C) -0.0 -0.2 -0.4 +0.1 +0.4
carbon source L-Citrulline +0.4 +0.0 -0.0 +0.0 -0.5
stress 1-ethyl-3-methylimidazolium chloride 170 mM -0.2 -0.0 -0.2 +0.2 +0.4
carbon source L-Ornithine +0.2 -0.2 +0.3 +0.1 -0.2
carbon source L-Leucine (C) +0.0 -0.2 -0.3 +0.5 +0.2
stress Cisplatin 0.006 mg/ml +0.2 +0.0 -0.5 -0.2 +0.7
stress Thallium(I) acetate 0.016 mg/ml +0.2 +0.2 +0.3 -0.4 +0.0
nitrogen source Parabanic Acid (N) +0.2 +0.1 -0.5 +0.1 +0.4
stress Paraquat dichloride 0.032 mg/mL -0.1 -0.1 +0.3 -0.2 +0.5
carbon source L-Citrulline -0.0 +0.2 +0.3 +0.4 -0.3
carbon source Carnitine Hydrochloride (C) +0.1 +0.0 +0.0 -0.2 +0.6
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.0 +0.2 +0.3 -0.2 +0.3
stress Choline Lysine 12 mM -0.2 +0.1 -0.1 +0.3 +0.4
stress Benzalkonium Chloride 0.01 mg/ml -0.1 +0.1 -0.1 +0.3 +0.4
stress Cisplatin 0.006 mg/ml -0.1 +0.1 +0.2 +0.3 +1.2
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