Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_19900 and AO353_19905 are separated by 74 nucleotidesAO353_19905 and AO353_19910 overlap by 4 nucleotidesAO353_19910 and AO353_19915 overlap by 1 nucleotidesAO353_19915 and AO353_19920 overlap by 4 nucleotides AO353_19900: AO353_19900 - universal stress protein UspA, at 4,374,327 to 4,375,238 _19900 AO353_19905: AO353_19905 - ABC transporter, at 4,375,313 to 4,376,032 _19905 AO353_19910: AO353_19910 - glycosyl hydrolase family 18, at 4,376,029 to 4,376,916 _19910 AO353_19915: AO353_19915 - RND transporter, at 4,376,916 to 4,378,409 _19915 AO353_19920: AO353_19920 - ABC transporter permease, at 4,378,406 to 4,379,548 _19920
Group Condition AO353_19900 AO353_19905 AO353_19910 AO353_19915 AO353_19920
anaerobic N1B4wt with N2E3m denitrifying replicate C -2.0 -0.0 -0.0 -0.1 -0.2
motility outer cut, LB soft agar motility assay -0.2 -0.7 +0.0 -0.2 -0.3
motility outer cut, LB soft agar motility assay +0.1 -0.5 +0.0 -0.7 -0.2
carbon source L-Citrulline -0.5 -0.4 +0.0 -0.1 -0.1
carbon source L-Citrulline -0.1 -0.6 +0.1 -0.4 -0.1
stress acetate 68 mM -0.2 -0.5 +0.0 +0.0 -0.3
carbon source L-Phenylalanine (C) +0.2 -0.8 +0.1 -0.3 -0.1
stress Lomefloxacin 0.001 mM -0.5 -0.3 -0.1 +0.1 -0.0
carbon source L-Tryptophan (C) -0.0 -0.5 +0.1 -0.2 -0.1
stress Choline chloride 268.5 mM -0.1 -0.5 -0.0 -0.1 -0.1
carbon source L-Citrulline -0.1 +0.0 -0.3 -0.2 -0.2
stress A22 0.002 mg/ml +0.0 -0.4 -0.1 -0.2 -0.1
denitrifying Nitrate reduction, replicate C -0.2 +0.1 -0.1 -0.5 +0.0
stress Cisplatin 0.006 mg/ml -0.3 -0.5 +0.0 +0.1 +0.2
carbon source L-Alanine (C) +0.2 -0.5 +0.1 +0.0 -0.2
nitrogen source Gly-DL-Asp (N) -0.1 -0.4 +0.2 +0.1 -0.1
pH Minimal media pH9 -0.0 -0.6 +0.1 +0.2 +0.0
carbon source L-Ornithine -0.1 +0.4 -0.3 -0.3 +0.0
pH Minimal media pH9 -0.1 +0.3 +0.1 -0.3 -0.1
carbon source L-Leucine (C) +0.2 -0.2 +0.2 -0.0 -0.2
stress Cobalt chloride 0.32 mM -0.1 -0.3 -0.1 +0.2 +0.1
motility outer cut, LB soft agar motility assay -0.1 +0.5 +0.2 -0.8 +0.2
carbon source Glycerol (C) +0.2 +0.1 -0.1 -0.3 -0.1
carbon source acetate (C) -0.2 -0.4 -0.0 +0.3 +0.2
stress Cisplatin 0.006 mg/ml -0.2 -0.3 +0.0 +0.4 +0.0
stress Chloramphenicol 0.0025 mg/ml +0.2 -0.3 +0.1 -0.1 +0.1
carbon source D-Glucose -0.1 +0.4 -0.1 -0.1 -0.0
stress Nickel (II) chloride 0.625 mM -0.2 +0.3 +0.1 -0.2 +0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.2 +0.6 +0.1 -0.1 -0.0
stress Fusidic 0.125 mg/ml +0.1 +0.5 -0.0 +0.2 +0.0
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