Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18815 and AO353_18820 are separated by 50 nucleotidesAO353_18820 and AO353_18825 are separated by 33 nucleotidesAO353_18825 and AO353_18830 are separated by 76 nucleotidesAO353_18830 and AO353_18835 are separated by 0 nucleotides AO353_18815: AO353_18815 - flagellar motor protein MotD, at 4,137,554 to 4,138,441 _18815 AO353_18820: AO353_18820 - cobalamin biosynthesis protein CobQ, at 4,138,492 to 4,139,280 _18820 AO353_18825: AO353_18825 - chemotaxis protein CheW, at 4,139,314 to 4,140,210 _18825 AO353_18830: AO353_18830 - chemotaxis protein CheW, at 4,140,287 to 4,140,772 _18830 AO353_18835: AO353_18835 - chemotaxis protein, at 4,140,773 to 4,141,165 _18835
Group Condition AO353_18815 AO353_18820 AO353_18825 AO353_18830 AO353_18835
motility outer cut, LB soft agar motility assay -2.7 -1.8 -2.6 -3.7 N.D.
motility outer cut, LB soft agar motility assay -2.1 -1.6 -2.4 -2.2 N.D.
motility outer cut, LB soft agar motility assay -1.8 -2.0 -1.4 -0.8 N.D.
survival 4C survival; 672 hrs -1.4 -0.2 -1.5 -1.9 N.D.
survival 4C survival; 360 hrs -0.9 -0.4 -0.7 -1.5 N.D.
survival 4C survival; 192 hrs -0.7 -0.1 -0.5 -1.1 N.D.
carbon source D-Glucose +0.1 +0.1 -0.4 -1.2 N.D.
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.4 -0.4 -0.6 N.D.
carbon source L-Citrulline +0.4 -0.1 -0.1 -1.4 N.D.
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.1 -0.0 -0.1 -0.9 N.D.
pH Minimal media pH6 -0.1 +0.2 +0.2 -1.2 N.D.
pH Minimal media pH9 -0.5 -0.4 +0.2 -0.1 N.D.
carbon source Tween 20 (C) -0.3 +0.1 -0.2 -0.3 N.D.
carbon source succinate (C) -0.2 +0.1 -0.1 -0.5 N.D.
nitrogen source Parabanic Acid (N) +0.2 -0.3 +0.0 -0.6 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron +0.7 -0.4 -0.2 -0.6 N.D.
carbon source L-Tryptophan (C) +0.3 +0.2 -0.4 -0.5 N.D.
stress Thallium(I) acetate 0.016 mg/ml +0.5 +0.1 -0.0 -0.5 N.D.
carbon source L-Citrulline -0.3 -0.0 -0.2 +0.5 N.D.
carbon source L-Valine (C) +0.5 -0.4 -0.0 +0.0 N.D.
stress Thallium(I) acetate 0.008 mg/ml +0.3 +0.3 -0.3 -0.2 N.D.
stress Nickel (II) chloride 0.625 mM +0.1 +0.1 -0.4 +0.4 N.D.
carbon source L-Citrulline +0.6 +0.1 -0.7 +0.4 N.D.
stress copper (II) chloride 2.5 mM +0.2 +0.2 -0.2 +0.4 N.D.
lb LB +0.3 +0.6 -0.1 -0.3 N.D.
stress Cisplatin 0.006 mg/ml +0.2 +0.2 -0.1 +0.3 N.D.
stress Furfuryl Alcohol 0.25 vol% +0.3 +0.4 +0.2 -0.1 N.D.
denitrifying Nitrate reduction, replicate C +0.7 -0.0 -0.1 +0.3 N.D.
radiation Ionizing radiation, 126.196 Gy, +0.5 -0.1 +0.2 +0.4 N.D.
stress methylglyoxal 0.009 vol% +0.6 +0.4 +0.2 +0.1 N.D.
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