Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18775 and AO353_18780 are separated by 114 nucleotidesAO353_18780 and AO353_18785 overlap by 4 nucleotidesAO353_18785 and AO353_18790 are separated by 154 nucleotidesAO353_18790 and AO353_18795 are separated by 31 nucleotides AO353_18775: AO353_18775 - flagellar biosynthesis protein FlhF, at 4,128,971 to 4,130,302 _18775 AO353_18780: AO353_18780 - cobyrinic acid a,c-diamide synthase, at 4,130,417 to 4,131,247 _18780 AO353_18785: AO353_18785 - flagellar biosynthesis sigma factor, at 4,131,244 to 4,131,984 _18785 AO353_18790: AO353_18790 - histidine kinase, at 4,132,139 to 4,132,522 _18790 AO353_18795: AO353_18795 - protein phosphatase, at 4,132,554 to 4,133,342 _18795
Group Condition AO353_18775 AO353_18780 AO353_18785 AO353_18790 AO353_18795
motility outer cut, LB soft agar motility assay -3.1 -1.5 -2.3 -4.5 -1.0
motility outer cut, LB soft agar motility assay -2.9 -2.3 -3.7 -0.8 -1.6
motility outer cut, LB soft agar motility assay -1.8 -2.5 -2.6 -1.9 -1.2
survival 4C survival; 360 hrs -1.3 -2.6 -2.7 -2.4 +0.3
carbon source propionate (C) -1.0 -3.5 -0.1 -0.3 +0.0
carbon source propionate (C) -1.4 -2.9 -0.3 +0.3 +0.0
survival 4C survival; 672 hrs +1.0 -2.3 -2.6 -0.5 +0.5
carbon source butyrate (C) -0.6 -3.0 -0.0 -0.4 +0.0
survival 4C survival; 192 hrs -0.7 -2.1 -0.8 -0.5 +0.1
carbon source Cytidine (C) -1.1 -2.8 +0.0 -0.2 +0.2
stress Cisplatin 0.006 mg/ml -1.0 -2.7 -0.3 +0.1 +0.1
stress Cisplatin 0.006 mg/ml -1.5 -1.7 +0.2 -0.3 -0.2
stress perchlorate 75 mM -1.8 -1.8 +0.1 -0.2 +0.3
carbon source Uridine (C) -0.6 -2.7 +0.0 +0.2 +0.0
carbon source L-Leucine (C) -1.0 -1.9 +0.0 -0.0 +0.2
pH Minimal media pH9 -0.9 -1.8 +0.3 +0.1 -0.2
stress nitrate 200 mM -1.6 -1.2 +0.2 +0.1 +0.2
stress Thallium(I) acetate 0.016 mg/ml -0.9 -1.9 +0.2 +0.2 -0.0
stress Benzalkonium Chloride 0.012 mg/ml -0.3 -2.3 +0.3 -0.3 +0.4
carbon source D-Glucosamine Hydrochloride (C) -1.1 -1.3 +0.7 +0.0 -0.1
stress Thallium(I) acetate 0.008 mg/ml -0.7 -1.4 -0.1 +0.8 -0.1
carbon source L-Ornithine -0.8 -1.2 +0.3 +0.2 +0.6
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -1.7 +0.5 +0.7 -0.1
stress Cholin acetate 38 mM +1.9 -1.8 +0.1 -0.2 +0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +1.6 -1.1 +0.3 -0.4 -0.2
stress Cholin acetate 10 mM +2.3 -1.3 +0.1 -0.0 +0.3
stress Cholin acetate 19 mM +3.0 -1.1 +0.1 -0.4 +0.2
stress 1-ethyl-3-methylimidazolium acetate 15 mM +3.0 -1.4 +0.3 -0.1 +0.1
stress acetate 34 mM +3.1 -1.1 +0.0 -0.2 +0.3
stress 1-ethyl-3-methylimidazolium acetate 20 mM +2.9 -0.9 +0.2 -0.0 +0.3
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