Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18740 and AO353_18745 overlap by 1 nucleotidesAO353_18745 and AO353_18750 are separated by 24 nucleotidesAO353_18750 and AO353_18755 are separated by 3 nucleotidesAO353_18755 and AO353_18760 are separated by 3 nucleotides AO353_18740: AO353_18740 - flagellar assembly protein FliO, at 4,122,212 to 4,122,643 _18740 AO353_18745: AO353_18745 - flagellar biosynthesis protein flip, at 4,122,643 to 4,123,392 _18745 AO353_18750: AO353_18750 - flagellar biosynthetic protein FliQ, at 4,123,417 to 4,123,686 _18750 AO353_18755: AO353_18755 - flagellar biosynthetic protein FliR, at 4,123,690 to 4,124,472 _18755 AO353_18760: AO353_18760 - flagellar biosynthetic protein FlhB, at 4,124,476 to 4,125,615 _18760
Group Condition AO353_18740 AO353_18745 AO353_18750 AO353_18755 AO353_18760
motility outer cut, LB soft agar motility assay N.D. -2.5 -2.7 -3.2 -2.8
motility outer cut, LB soft agar motility assay N.D. -2.5 -2.1 -3.0 -3.0
motility outer cut, LB soft agar motility assay N.D. -2.9 -2.6 -2.0 -1.7
survival 4C survival; 360 hrs N.D. -2.2 -1.6 -2.0 -1.6
survival 4C survival; 672 hrs N.D. -1.0 -1.7 -1.6 -1.6
survival 4C survival; 192 hrs N.D. -0.8 -1.1 -0.9 -1.2
stress Cobalt chloride 0.32 mM N.D. -2.2 -0.3 +0.1 -0.2
carbon source L-Leucine (C) N.D. -2.6 -0.1 -0.0 +0.2
stress Doxycycline hyclate 0.0006 mg/ml N.D. -2.6 -0.0 +0.1 +0.1
radiation Ionizing radiation, 126.196 Gy, N.D. -1.8 +0.4 -0.1 -0.1
carbon source acetate (C) N.D. -0.9 +0.1 -0.3 -0.2
stress Nickel (II) chloride 0.625 mM N.D. -0.9 +0.1 +0.2 -0.4
denitrifying Nitrate reduction, replicate B N.D. -1.3 -0.2 +0.4 +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -0.6 +0.9 -0.6 -0.1
stress methylglyoxal 0.009 vol% N.D. -0.4 -0.1 +0.6 -0.5
carbon source L-Citrulline N.D. -0.7 +0.5 +0.1 +0.2
nitrogen source Parabanic Acid (N) N.D. +1.0 +0.3 -0.4 -0.1
stress Thallium(I) acetate 0.008 mg/ml N.D. +1.2 -0.3 -0.1 -0.0
carbon source L-Ornithine N.D. +0.8 +0.2 +0.6 -0.1
carbon source L-Citrulline N.D. -0.2 +0.9 +0.4 +0.4
stress Thallium(I) acetate 0.016 mg/ml N.D. +0.7 +0.3 +0.4 +0.2
stress acetate 34 mM N.D. +0.7 +0.4 +0.3 +0.4
stress Rifampicin 0.005 mg/ml N.D. +0.1 +0.5 +0.7 +0.8
stress Cisplatin 0.006 mg/ml N.D. +0.7 +0.7 +0.7 +0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM N.D. +1.1 +0.3 +0.5 +0.3
stress Cholin acetate 19 mM N.D. +0.5 +0.7 +0.6 +0.5
stress 1-ethyl-3-methylimidazolium acetate 15 mM N.D. +1.1 +0.7 +0.4 +0.2
carbon source D-Glucosamine Hydrochloride (C) N.D. +0.4 +0.8 +0.8 +0.8
stress 1-ethyl-3-methylimidazolium acetate 20 mM N.D. +1.6 +0.2 +0.5 +0.5
stress Cisplatin 0.006 mg/ml N.D. +2.6 -0.1 +0.3 +0.3
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