Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_18685 and AO353_18690 are separated by 4 nucleotidesAO353_18690 and AO353_18695 overlap by 11 nucleotidesAO353_18695 and AO353_18700 are separated by 6 nucleotidesAO353_18700 and AO353_18705 are separated by 77 nucleotides AO353_18685: AO353_18685 - flagellar motor switch protein FliG, at 4,112,376 to 4,113,395 _18685 AO353_18690: AO353_18690 - flagellar assembly protein FliH, at 4,113,400 to 4,114,209 _18690 AO353_18695: AO353_18695 - flagellar protein export ATPase FliI, at 4,114,199 to 4,115,557 _18695 AO353_18700: AO353_18700 - flagellar biogenesis protein, at 4,115,564 to 4,116,013 _18700 AO353_18705: AO353_18705 - anti-anti-sigma factor, at 4,116,091 to 4,116,399 _18705
Group Condition AO353_18685 AO353_18690 AO353_18695 AO353_18700 AO353_18705
motility outer cut, LB soft agar motility assay -2.7 -1.5 -2.1 -2.6 -0.9
motility outer cut, LB soft agar motility assay -2.5 -2.0 -2.6 -2.0 +0.3
motility outer cut, LB soft agar motility assay -2.3 -2.5 -1.5 -0.3 +0.0
survival 4C survival; 360 hrs -2.5 -1.5 -1.5 -1.1 +1.2
survival 4C survival; 192 hrs -1.3 -0.8 -1.0 -0.7 -0.2
survival 4C survival; 672 hrs -1.7 -1.5 -1.5 -2.3 +4.2
carbon source D-Glucose -0.1 +0.4 -0.0 -0.5 -1.3
carbon source Uridine (C) +0.1 -0.1 +0.2 -0.2 -1.6
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.1 +0.4 -0.1 -0.7 -0.8
carbon source L-Isoleucine (C) +0.1 +0.1 +0.2 -0.1 -1.5
carbon source L-Citrulline +0.2 +0.2 +0.3 -1.6 -0.2
denitrifying Nitrate reduction, replicate C +0.6 -0.3 -0.1 -1.3 +0.3
carbon source m-Inositol (C) +0.3 +0.1 +0.3 +0.2 -1.4
stress Cholin acetate 38 mM +0.6 -0.1 +0.2 -1.1 +0.1
nitrogen source Inosine (N) +0.3 +0.5 +0.4 -0.7 -0.8
pH Minimal media pH6 +0.1 +0.5 +0.1 +0.4 -1.1
stress acetate 34 mM +0.9 -0.1 +0.2 -0.7 -0.3
carbon source L-Proline (C) +0.2 -0.2 +0.0 +0.9 -0.8
carbon source m-Inositol (C) +0.1 +0.4 +0.1 +0.7 -1.1
carbon source L-Leucine (C) +0.4 +0.2 -0.1 +0.9 -1.0
denitrifying Nitrate reduction, replicate B +0.7 -0.4 +0.3 -0.5 +0.3
nitrogen source Urea (N) +0.2 +0.3 +0.4 +0.9 -1.2
stress 1-ethyl-3-methylimidazolium acetate 15 mM +1.1 -0.1 +0.4 -0.8 +0.2
stress Tetracycline 0.0016 mg/ml +0.3 +0.8 +0.4 -0.5 +0.3
carbon source acetate (C) +0.4 -0.4 +0.3 +0.4 +0.5
stress Cholin acetate 19 mM +0.9 +0.4 +0.4 -0.4 -0.1
stress Spectinomycin 0.2 mg/ml +0.5 +0.5 +0.2 +0.6 -0.4
carbon source D-Glucosamine Hydrochloride (C) +0.8 +0.8 +0.7 +1.0 -1.6
stress Lomefloxacin 0.001 mM +0.2 +0.7 +0.6 -0.4 +0.7
stress Rifampicin 0.005 mg/ml +1.0 +1.1 +0.8 -0.4 +0.4
remove
AO353_18685
plot
remove
AO353_18690
plot
remove
AO353_18695
remove
AO353_18700
plot
remove
AO353_18705
plot