Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18660 and AO353_18665 are separated by 110 nucleotidesAO353_18665 and AO353_18670 overlap by 1 nucleotidesAO353_18670 and AO353_18675 are separated by 291 nucleotidesAO353_18675 and AO353_18680 are separated by 15 nucleotides AO353_18660: AO353_18660 - AAA family ATPase, at 4,105,756 to 4,107,231 _18660 AO353_18665: AO353_18665 - histidine kinase, at 4,107,342 to 4,108,559 _18665 AO353_18670: AO353_18670 - Fis family transcriptional regulator, at 4,108,559 to 4,109,959 _18670 AO353_18675: AO353_18675 - flagellar hook-basal body protein FliE, at 4,110,251 to 4,110,580 _18675 AO353_18680: AO353_18680 - flagellar M-ring protein FliF, at 4,110,596 to 4,112,383 _18680
Group Condition AO353_18660 AO353_18665 AO353_18670 AO353_18675 AO353_18680
motility outer cut, LB soft agar motility assay -3.0 -2.7 -2.3 -2.4 -3.9
motility outer cut, LB soft agar motility assay -3.2 -3.0 -2.4 -2.4 -2.9
motility outer cut, LB soft agar motility assay -2.2 -2.4 -1.9 -2.0 -2.8
survival 4C survival; 360 hrs -2.5 -1.2 -1.0 -2.0 -1.8
survival 4C survival; 672 hrs -2.4 -0.8 -0.8 -1.8 -2.1
survival 4C survival; 192 hrs -1.7 -0.9 -0.6 -1.1 -1.3
carbon source L-Leucine (C) +0.2 +0.0 -0.9 +0.3 -0.4
carbon source L-Citrulline +0.7 +0.3 -0.2 -1.0 -0.0
stress Cholin acetate 38 mM -0.5 -0.0 +0.1 -0.4 +0.7
stress acetate 17 mM -0.8 +0.3 +0.2 +0.1 +0.4
stress Cholin acetate 10 mM -0.7 +0.1 -0.0 +0.6 +0.5
stress 1-ethyl-3-methylimidazolium acetate 30 mM -1.0 +0.3 +0.1 +0.5 +0.7
stress Benzalkonium Chloride 0.012 mg/ml -0.4 +0.2 -0.2 +0.5 +0.4
stress Doxycycline hyclate 0.0006 mg/ml +0.5 +0.5 -0.8 +0.4 -0.2
stress acetate 68 mM -0.7 -0.2 +0.1 +0.6 +0.7
carbon source D-Lactate (C) +0.8 +0.4 -0.2 -0.4 +0.1
stress Cisplatin 0.006 mg/ml +0.3 -0.5 +0.3 +0.4 +0.4
stress acetate 34 mM -0.6 +0.1 +0.3 +0.8 +0.7
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.6 +0.3 +0.1 +0.6 +1.1
carbon source L-Citrulline +0.7 +0.4 -0.2 +0.3 +0.3
stress 1-ethyl-3-methylimidazolium acetate 15 mM -0.7 +0.3 +0.2 +0.7 +1.0
carbon source L-Citrulline +0.8 +0.5 +0.3 -0.1 +0.1
nitrogen source Urea (N) +0.5 +0.1 -0.0 +0.6 +0.5
carbon source L-Ornithine +0.7 +0.2 +0.3 +0.2 +0.3
carbon source pyruvate (C) +1.3 +0.3 +0.1 +0.1 -0.0
carbon source D-Glucose +0.9 +0.6 +0.2 -0.1 +0.4
stress Cholin acetate 19 mM -0.6 +0.2 +0.5 +0.8 +1.3
stress Rifampicin 0.005 mg/ml +0.8 +0.5 +0.1 +0.6 +0.7
carbon source a-Ketoglutaric (C) +1.7 +0.4 +0.6 +0.4 +0.4
carbon source D-Glucosamine Hydrochloride (C) +0.8 +0.6 +0.6 +0.9 +0.8
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