Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18640 and AO353_18645 are separated by 81 nucleotidesAO353_18645 and AO353_18650 are separated by 153 nucleotidesAO353_18650 and AO353_18655 are separated by 24 nucleotidesAO353_18655 and AO353_18660 are separated by 170 nucleotides AO353_18640: AO353_18640 - flagellar biosynthesis protein FlaG, at 4,102,889 to 4,103,239 _18640 AO353_18645: AO353_18645 - flagellar cap protein FliD, at 4,103,321 to 4,104,721 _18645 AO353_18650: AO353_18650 - flagellar export chaperone FliS, at 4,104,875 to 4,105,264 _18650 AO353_18655: AO353_18655 - flagellar assembly protein FliT, at 4,105,289 to 4,105,585 _18655 AO353_18660: AO353_18660 - AAA family ATPase, at 4,105,756 to 4,107,231 _18660
Group Condition AO353_18640 AO353_18645 AO353_18650 AO353_18655 AO353_18660
motility outer cut, LB soft agar motility assay -0.5 -2.3 -3.4 +0.1 -3.2
motility outer cut, LB soft agar motility assay -0.0 -3.2 -2.2 +0.2 -3.0
survival 4C survival; 360 hrs +0.1 -2.0 -2.2 -1.2 -2.5
survival 4C survival; 672 hrs +0.3 -1.4 -2.0 -1.4 -2.4
motility outer cut, LB soft agar motility assay -0.3 -2.2 -2.0 +1.6 -2.2
survival 4C survival; 192 hrs -0.3 -1.4 -1.2 -0.6 -1.7
stress Cholin acetate 19 mM +0.0 -0.1 -0.2 -1.3 -0.6
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.1 +0.4 -0.2 -1.0 -1.0
stress Cholin acetate 10 mM +0.0 -0.0 -0.2 -0.8 -0.7
anaerobic Anaerobic, acetate donor; nitrate and iron -0.9 +0.1 -0.0 -0.2 -0.4
stress perchlorate 75 mM -0.1 +0.2 +0.3 -0.8 -0.9
nitrogen source Parabanic Acid (N) +0.1 +0.4 -0.1 -1.4 -0.2
stress nitrate 200 mM +0.1 +0.1 +0.5 -0.3 -1.2
stress Rifampicin 0.005 mg/ml -0.3 -0.1 +0.3 -0.4 +0.8
carbon source L-Ornithine -0.6 +0.5 -0.1 -0.1 +0.7
carbon source L-Ornithine -0.1 +0.3 -0.2 -0.2 +0.7
stress Cisplatin 0.006 mg/ml +0.0 +0.2 -0.6 +0.5 +0.3
carbon source D-Glucose -0.3 +0.1 +0.4 -0.4 +0.7
carbon source L-Citrulline (C) -0.2 +0.0 +0.2 +0.6 +0.6
denitrifying Nitrate reduction, replicate C -0.2 +0.1 +0.1 +0.7 +0.4
carbon source m-Inositol (C) -0.2 +0.4 +0.3 +0.5 +0.3
carbon source L-Citrulline -0.1 +0.0 +0.1 +0.7 +0.7
nitrogen source Inosine (N) -0.3 +0.2 +0.1 +0.9 +0.6
nitrogen source Urea (N) +0.1 +0.2 +0.1 +0.7 +0.5
carbon source L-Isoleucine (C) +0.3 -0.1 +0.2 +0.9 +0.4
carbon source D-Glucose +0.2 +0.2 +0.2 +0.5 +0.9
carbon source acetate (C) +0.5 +0.1 +0.2 +0.7 +0.5
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.2 +0.5 +0.5 +0.8
carbon source pyruvate (C) +0.3 +0.1 +0.2 +1.0 +1.3
carbon source a-Ketoglutaric (C) -0.1 +0.4 +0.8 +1.4 +1.7
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