Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18585 and AO353_18590 are separated by 281 nucleotidesAO353_18590 and AO353_18595 are separated by 368 nucleotidesAO353_18595 and AO353_18600 are separated by 45 nucleotidesAO353_18600 and AO353_18605 are separated by 51 nucleotides AO353_18585: AO353_18585 - Phenylalanine 4-monooxygenase (EC 1.14.16.1) (from data), at 4,088,510 to 4,089,301 _18585 AO353_18590: AO353_18590 - AAA family ATPase, at 4,089,583 to 4,091,145 _18590 AO353_18595: AO353_18595 - flagellar biosynthesis protein FlgF, at 4,091,514 to 4,092,254 _18595 AO353_18600: AO353_18600 - flagellar basal-body rod protein FlgG, at 4,092,300 to 4,093,085 _18600 AO353_18605: AO353_18605 - flagellar basal body L-ring protein, at 4,093,137 to 4,093,817 _18605
Group Condition AO353_18585 AO353_18590 AO353_18595 AO353_18600 AO353_18605
motility outer cut, LB soft agar motility assay +0.1 +0.4 -2.1 -4.0 -3.0
motility outer cut, LB soft agar motility assay -0.1 +0.5 -3.8 -1.5 -1.9
carbon source L-Phenylalanine (C) -3.6 -3.3 +0.1 +0.4 -0.2
motility outer cut, LB soft agar motility assay +0.3 +0.5 -2.6 -1.5 -2.4
survival 4C survival; 360 hrs +0.2 +0.4 -1.6 -2.3 -1.6
nitrogen source L-Phenylalanine (N) -2.3 -2.4 -0.3 +0.2 -0.1
survival 4C survival; 672 hrs +0.5 +0.6 -1.2 -2.0 -1.5
survival 4C survival; 192 hrs +0.3 +0.5 -1.8 -1.2 -1.1
nitrogen source L-tyrosine (N) -1.1 -2.3 -0.1 +0.3 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 -0.1 -0.2 -1.4 -0.8
stress Chlorite 0.16 mM -1.4 -0.6 +0.2 +0.5 -0.0
stress Doxycycline hyclate 0.0006 mg/ml -0.4 -0.1 -1.2 +0.6 -0.1
stress Lomefloxacin 0.001 mM -0.5 -0.3 +0.8 +0.8 +0.1
stress Rifampicin 0.005 mg/ml -0.7 +0.1 +0.7 +0.8 +0.3
stress perchlorate 75 mM +0.5 +0.8 +0.3 -0.2 -0.0
stress methylglyoxal 0.009 vol% +0.6 +0.9 +0.2 -0.2 +0.0
carbon source D-Glucose +0.5 +0.6 +0.1 +0.7 -0.2
carbon source L-Citrulline (C) +0.6 +0.8 +0.3 +0.1 -0.1
carbon source D-Trehalose (C) +0.3 +0.6 +0.3 +0.4 +0.3
stress nitrate 200 mM +0.6 +0.6 +0.3 +0.2 +0.3
carbon source L-Ornithine +1.0 +0.7 -0.5 +0.3 +0.5
carbon source D-Glucose +0.6 +0.7 +0.2 +0.4 +0.1
carbon source L-Ornithine +0.8 +0.8 +0.2 +0.1 +0.2
carbon source L-Citrulline +0.8 +0.8 +0.2 +0.6 -0.3
carbon source L-Citrulline +0.9 +0.9 +0.3 +0.2 -0.1
carbon source L-Ornithine +0.8 +0.6 +0.5 +0.2 +0.2
carbon source L-Ornithine +0.8 +0.7 +0.3 +0.4 +0.2
carbon source D-Glucosamine Hydrochloride (C) +0.1 +0.1 +0.8 +0.9 +0.5
carbon source L-Citrulline +0.9 +1.0 +0.6 +0.2 +0.1
carbon source L-Citrulline +1.1 +1.0 +0.1 +1.6 +0.2
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