Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18330 and AO353_18335 overlap by 4 nucleotidesAO353_18335 and AO353_18340 are separated by 673 nucleotidesAO353_18340 and AO353_18345 are separated by 9 nucleotidesAO353_18345 and AO353_18350 are separated by 267 nucleotides AO353_18330: AO353_18330 - short-chain dehydrogenase, at 4,040,691 to 4,040,957 _18330 AO353_18335: AO353_18335 - hypothetical protein, at 4,040,954 to 4,041,238 _18335 AO353_18340: AO353_18340 - hypothetical protein, at 4,041,912 to 4,042,520 _18340 AO353_18345: AO353_18345 - hypothetical protein, at 4,042,530 to 4,043,129 _18345 AO353_18350: AO353_18350 - thioredoxin, at 4,043,397 to 4,044,134 _18350
Group Condition AO353_18330 AO353_18335 AO353_18340 AO353_18345 AO353_18350
carbon source L-Tryptophan (C) N.D. -1.5 -0.4 -0.0 -0.0
pH Minimal media pH9 N.D. -1.7 -0.2 +0.0 +0.1
stress Cisplatin 0.006 mg/ml N.D. -1.0 +0.3 -0.4 -0.5
carbon source D-Glucose N.D. -1.2 -0.2 -0.1 +0.0
nitrogen source Parabanic Acid (N) N.D. -1.4 -0.2 +0.0 +0.1
stress copper (II) chloride 2.5 mM N.D. -1.1 -0.3 -0.2 +0.1
carbon source a-Ketoglutaric (C) N.D. -1.0 -0.2 +0.0 +0.0
nitrogen source L-Histidine (N) N.D. -1.3 -0.0 +0.0 +0.2
stress Cisplatin 0.006 mg/ml N.D. -1.5 +0.2 +0.1 +0.1
carbon source L-Valine (C) N.D. -1.3 -0.0 +0.3 +0.1
stress Paraquat dichloride 0.032 mg/mL N.D. -0.8 -0.1 -0.1 +0.1
stress methylglyoxal 0.009 vol% N.D. -0.9 -0.3 +0.1 +0.2
carbon source L-Citrulline N.D. -0.7 -0.2 -0.3 +0.2
carbon source D-Alanine (C) N.D. -0.9 +0.0 -0.0 +0.1
carbon source L-Citrulline N.D. -1.0 +0.3 -0.2 -0.1
nitrogen source L-Glutamine (N) N.D. -1.2 +0.3 -0.0 +0.0
nitrogen source L-Threonine (N) N.D. -0.9 +0.1 -0.1 -0.0
carbon source casaminos (C) N.D. -1.0 -0.1 +0.0 +0.1
carbon source L-Ornithine N.D. -0.8 +0.3 -0.1 -0.2
motility outer cut, LB soft agar motility assay N.D. -0.7 -0.3 -0.1 +0.3
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -0.1 -1.0 +0.3 +0.1
denitrifying Nitrate reduction, replicate B N.D. -1.0 -0.1 +0.3 +0.2
survival 4C survival; 672 hrs N.D. -0.8 +0.2 +0.1 -0.1
denitrifying Nitrate reduction, replicate C N.D. -1.0 +0.1 +0.3 +0.1
carbon source D-Glucose N.D. -0.7 +0.4 +0.0 +0.1
carbon source L-Alanine (C) N.D. +0.6 -0.3 -0.3 -0.1
pH Minimal media pH9 N.D. +0.6 -0.4 -0.0 -0.1
carbon source L-Leucine (C) N.D. -0.5 +0.3 -0.0 +0.3
carbon source L-Aspartic Acid (C) N.D. +0.7 +0.3 +0.1 +0.0
stress Gentamicin 0.006 mg/ml N.D. +0.9 +0.2 +0.1 +0.2
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