Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 216 experiments or choose conditions or try the comparative fitness browser

500 ntAO353_18215 and AO353_18220 are separated by 129 nucleotidesAO353_18220 and AO353_18225 are separated by 190 nucleotidesAO353_18225 and AO353_18230 are separated by 395 nucleotidesAO353_18230 and AO353_18235 are separated by 54 nucleotides AO353_18215: AO353_18215 - multidrug DMT transporter permease, at 4,013,993 to 4,014,901 _18215 AO353_18220: AO353_18220 - isocitrate dehydrogenase, at 4,015,031 to 4,016,752 _18220 AO353_18225: AO353_18225 - ATP-dependent RNA helicase HrpA, at 4,016,943 to 4,020,854 _18225 AO353_18230: AO353_18230 - 3-oxoacyl-ACP synthase, at 4,021,250 to 4,022,371 _18230 AO353_18235: AO353_18235 - RNA polymerase subunit sigma-24, at 4,022,426 to 4,023,034 _18235
Group Condition AO353_18215 AO353_18220 AO353_18225 AO353_18230 AO353_18235
carbon source Tween 20 (C) -0.2 -3.0 -0.4 -0.5 -0.2
carbon source L-Leucine (C) -0.3 -3.7 +0.1 -0.0 -0.1
carbon source Tween 20 (C) -0.3 -3.0 -0.2 -0.3 +0.0
carbon source Ethanol (C) -0.3 -1.5 +0.1 -0.1 -0.1
carbon source Ethanol (C) -0.3 -1.3 -0.0 +0.0 -0.1
stress 1-ethyl-3-methylimidazolium acetate 30 mM +0.0 +0.0 -1.4 -0.4 +0.1
stress Tetracycline 0.0016 mg/ml -0.4 -0.1 -0.4 -0.7 -0.1
carbon source L-Isoleucine (C) -0.6 -0.3 -0.4 -0.0 -0.1
stress methylglyoxal 0.009 vol% -0.5 +0.0 -0.3 -0.6 -0.1
stress Rifampicin 0.005 mg/ml +0.2 +0.0 -0.5 -0.4 -0.7
stress Cobalt chloride 0.16 mM -0.1 +0.1 -1.0 -0.0 -0.2
carbon source acetate (C) -0.4 -0.8 +0.1 -0.1 +0.0
stress Doxycycline hyclate 0.0002 mg/ml +0.1 +0.0 -0.4 -0.7 -0.1
stress Spectinomycin 0.2 mg/ml -0.1 +0.1 -0.8 -0.2 +0.0
stress Fusidic 0.125 mg/ml +0.9 +0.8 -2.4 -0.2 +0.1
stress Spectinomycin 0.15 mg/ml +0.2 +0.2 -0.6 -0.3 -0.2
pH Minimal media pH9 -0.8 -0.3 +0.2 -0.1 +0.3
stress Lomefloxacin 0.001 mM +0.7 -0.2 -0.2 -0.4 -0.3
stress Benzalkonium Chloride 0.01 mg/ml +0.2 -0.1 -0.4 +0.6 -0.2
carbon source acetate (C) +0.3 -0.5 -0.0 +0.1 +0.3
stress Doxycycline hyclate 0.0006 mg/ml -0.0 +0.1 +0.7 -0.8 +0.5
carbon source L-Ornithine -0.2 -0.1 +0.5 -0.1 +0.5
stress Cisplatin 0.006 mg/ml +0.3 -0.1 +0.6 -0.3 +0.2
stress nitrate 200 mM -0.5 -0.0 +0.8 +0.4 +0.1
stress Cisplatin 0.006 mg/ml +0.2 +0.2 +0.6 -0.2 +0.1
motility outer cut, LB soft agar motility assay +0.4 +0.2 +0.6 -0.1 -0.1
carbon source L-Ornithine +0.0 -0.2 +0.6 +0.2 +0.3
stress Benzalkonium Chloride 0.012 mg/ml +0.5 +0.1 -0.1 +0.7 -0.0
survival 4C survival; 672 hrs +0.3 +0.1 -0.1 +0.4 +0.5
stress perchlorate 75 mM +0.1 +0.2 +1.0 +0.1 -0.1
remove
AO353_18215
plot
remove
AO353_18220
plot
remove
AO353_18225
remove
AO353_18230
plot
remove
AO353_18235
plot