Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18095 and AO353_18100 are separated by 904 nucleotidesAO353_18100 and AO353_18105 are separated by 453 nucleotidesAO353_18105 and AO353_18110 are separated by 12 nucleotidesAO353_18110 and AO353_18115 overlap by 4 nucleotides AO353_18095: AO353_18095 - hypothetical protein, at 3,984,472 to 3,985,086 _18095 AO353_18100: AO353_18100 - transcriptional regulator, at 3,985,991 to 3,986,623 _18100 AO353_18105: AO353_18105 - AraC family transcriptional regulator, at 3,987,077 to 3,987,667 _18105 AO353_18110: AO353_18110 - hypothetical protein, at 3,987,680 to 3,988,339 _18110 AO353_18115: AO353_18115 - hypothetical protein, at 3,988,336 to 3,989,169 _18115
Group Condition AO353_18095 AO353_18100 AO353_18105 AO353_18110 AO353_18115
stress Doxycycline hyclate 0.0006 mg/ml -2.0 -0.4 +0.0 -0.5 +0.1
carbon source L-Alanine (C) -1.0 -0.3 +0.1 -0.5 +0.0
stress Cisplatin 0.006 mg/ml -0.2 -0.8 +0.2 -0.0 -0.3
carbon source propionate (C) -0.3 -0.1 +0.0 -0.5 -0.3
carbon source L-Phenylalanine (C) -0.8 -0.1 +0.1 -0.4 +0.0
stress Doxycycline hyclate 0.0002 mg/ml -0.5 -0.0 -0.1 -0.3 -0.1
stress Gentamicin 0.006 mg/ml -0.4 -0.1 +0.0 -0.5 -0.1
carbon source L-Histidine (C) -0.6 +0.1 -0.1 -0.4 -0.1
carbon source L-Ornithine -0.4 -0.4 +0.1 -0.2 -0.2
carbon source propionate (C) +0.3 -0.1 -0.2 -0.6 -0.4
carbon source L-Citrulline -0.7 -0.4 -0.0 +0.1 +0.1
carbon source L-Ornithine -0.7 +0.0 -0.0 -0.4 +0.1
carbon source L-Ornithine -0.5 -0.1 -0.3 +0.1 -0.2
carbon source L-Tryptophan (C) -0.4 -0.0 -0.3 +0.2 -0.3
stress Cholin acetate 10 mM -0.9 +0.0 +0.2 +0.1 -0.1
survival 4C survival; 672 hrs -0.9 +0.0 +0.2 +0.0 +0.1
carbon source D-Glucose -0.4 -0.1 +0.2 -0.2 +0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C +0.3 +0.1 -0.1 -0.6 -0.1
carbon source L-Citrulline -0.2 +0.3 +0.1 -0.5 -0.1
stress Tetracycline 0.0008 mg/ml +0.5 -0.2 -0.0 -0.4 -0.1
nitrogen source L-Phenylalanine (N) -0.5 -0.2 +0.2 +0.2 +0.1
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM -0.7 +0.1 +0.1 +0.3 +0.2
stress Spectinomycin 0.1 mg/ml +0.6 -0.1 -0.3 -0.2 -0.0
stress Tetracycline 0.0016 mg/ml +0.3 +0.3 -0.1 -0.1 -0.3
stress Spectinomycin 0.2 mg/ml +0.6 +0.1 -0.0 -0.3 -0.3
carbon source acetate (C) +0.5 +0.0 +0.3 -0.4 -0.3
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.2 -0.1 -0.3 +0.3
stress Nickel (II) chloride 0.625 mM +0.7 -0.0 +0.1 -0.2 -0.2
stress Paraquat dichloride 0.032 mg/mL +0.3 +0.3 +0.3 -0.1 -0.2
motility outer cut, LB soft agar motility assay +0.1 +0.4 +0.5 +0.4 +0.1
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