Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_18085 and AO353_18090 are separated by 39 nucleotidesAO353_18090 and AO353_18095 are separated by 45 nucleotidesAO353_18095 and AO353_18100 are separated by 904 nucleotidesAO353_18100 and AO353_18105 are separated by 453 nucleotides AO353_18085: AO353_18085 - oxidase, at 3,982,543 to 3,983,772 _18085 AO353_18090: AO353_18090 - cytochrome C552, at 3,983,812 to 3,984,426 _18090 AO353_18095: AO353_18095 - hypothetical protein, at 3,984,472 to 3,985,086 _18095 AO353_18100: AO353_18100 - transcriptional regulator, at 3,985,991 to 3,986,623 _18100 AO353_18105: AO353_18105 - AraC family transcriptional regulator, at 3,987,077 to 3,987,667 _18105
Group Condition AO353_18085 AO353_18090 AO353_18095 AO353_18100 AO353_18105
carbon source L-Citrulline -0.2 -0.6 -0.7 -0.4 -0.0
stress Doxycycline hyclate 0.0006 mg/ml +0.1 +1.0 -2.0 -0.4 +0.0
carbon source L-Isoleucine (C) -0.3 -0.0 -0.6 -0.1 -0.1
carbon source L-Leucine (C) -0.7 -0.3 -0.2 -0.1 +0.1
carbon source L-Citrulline -0.3 -0.5 +0.2 -0.1 -0.2
carbon source L-Alanine (C) -0.1 +0.3 -1.0 -0.3 +0.1
carbon source L-Phenylalanine (C) -0.1 -0.0 -0.8 -0.1 +0.1
stress Lomefloxacin 0.001 mM +0.0 -0.8 +0.2 -0.1 -0.1
carbon source L-Ornithine +0.3 -0.3 -0.7 +0.0 -0.0
survival 4C survival; 672 hrs +0.1 -0.1 -0.9 +0.0 +0.2
stress Cholin acetate 38 mM -0.2 +0.3 -0.6 -0.1 -0.1
stress acetate 17 mM -0.3 +0.5 -0.6 -0.1 -0.0
stress Cisplatin 0.006 mg/ml -0.4 +0.6 -0.2 -0.8 +0.2
nitrogen source Gly-DL-Asp (N) -0.1 +0.3 -0.4 -0.2 -0.1
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM -0.1 +0.3 -0.7 +0.1 +0.1
carbon source D-Glucose +0.2 -0.3 -0.4 -0.1 +0.2
stress Cholin acetate 10 mM -0.0 +0.4 -0.9 +0.0 +0.2
stress Nalidixic 0.004 mg/ml -0.2 +0.4 -0.5 -0.0 -0.0
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.6 +0.4 -0.3 -0.0 +0.1
stress Doxycycline hyclate 0.0002 mg/ml +0.1 +0.3 -0.5 -0.0 -0.1
nitrogen source L-Phenylalanine (N) +0.0 +0.3 -0.5 -0.2 +0.2
stress acetate 34 mM -0.1 +0.3 -0.4 -0.1 +0.3
nitrogen source Glycine (N) -0.0 -0.4 +0.5 +0.1 -0.2
stress Benzalkonium Chloride 0.01 mg/ml -0.3 +0.4 -0.4 +0.1 +0.2
stress Spectinomycin 0.1 mg/ml +0.1 +0.1 +0.6 -0.1 -0.3
stress Cobalt chloride 0.32 mM -0.3 +0.1 +0.5 +0.1 +0.1
carbon source acetate (C) -0.5 +0.2 +0.5 +0.0 +0.3
carbon source L-Citrulline +0.4 +0.0 -0.2 +0.3 +0.1
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.3 +0.3 +0.2 -0.1
motility outer cut, LB soft agar motility assay -0.1 +0.4 +0.1 +0.4 +0.5
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