Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_17795 and AO353_17800 overlap by 4 nucleotidesAO353_17800 and AO353_17805 overlap by 4 nucleotidesAO353_17805 and AO353_17810 are separated by 120 nucleotidesAO353_17810 and AO353_17815 are separated by 78 nucleotides AO353_17795: AO353_17795 - methyltransferase, at 3,920,481 to 3,921,191 _17795 AO353_17800: AO353_17800 - sugar translocase, at 3,921,188 to 3,921,574 _17800 AO353_17805: AO353_17805 - hypothetical protein, at 3,921,571 to 3,923,676 _17805 AO353_17810: AO353_17810 - LysR family transcriptional regulator, at 3,923,797 to 3,924,741 _17810 AO353_17815: AO353_17815 - hypothetical protein, at 3,924,820 to 3,926,010 _17815
Group Condition AO353_17795 AO353_17800 AO353_17805 AO353_17810 AO353_17815
stress Cisplatin 0.006 mg/ml +0.1 -0.5 -0.0 -0.6 -0.4
carbon source L-Leucine (C) -0.2 -0.1 -0.1 -0.3 -0.4
denitrifying Nitrate reduction, replicate B -0.2 -0.4 -0.1 -0.2 +0.1
stress Benzalkonium Chloride 0.012 mg/ml -0.2 -0.2 +0.0 -0.5 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.3 -0.1 -0.6 -0.2
carbon source propionate (C) +0.1 +0.2 +0.3 -1.6 +0.4
carbon source L-Alanine (C) +0.1 -0.0 +0.1 -0.6 +0.1
carbon source D-Glucose -0.3 -0.1 -0.1 -0.4 +0.5
stress Lomefloxacin 0.001 mM -0.2 -0.6 +0.1 +0.1 +0.2
carbon source L-Citrulline -0.1 -0.2 -0.0 -0.4 +0.4
carbon source acetate (C) -0.3 -0.3 -0.1 +0.3 +0.2
stress methylglyoxal 0.009 vol% -0.2 +0.1 -0.1 +0.4 -0.4
stress methylglyoxal 0.008 vol% +0.2 -0.4 +0.1 -0.1 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.2 -0.2 -0.2 +0.5 -0.4
carbon source propionate (C) +0.0 +0.3 +0.2 -1.0 +0.3
stress Tetracycline 0.0016 mg/ml -0.1 -0.2 -0.1 +0.3 +0.1
carbon source L-Citrulline +0.4 -0.1 +0.1 -0.1 -0.2
survival 4C survival; 672 hrs -0.4 -0.3 +0.2 +0.5 +0.1
pH Minimal media pH9 +0.2 -0.3 +0.1 +0.2 -0.0
stress Cisplatin 0.006 mg/ml +0.1 -0.0 +0.3 +0.3 -0.5
carbon source L-Aspartic Acid (C) +0.2 -0.3 +0.1 +0.3 -0.1
stress Ceftazidime 0.12 mg/ml -0.1 -0.2 +0.1 +0.6 -0.1
nitrogen source Parabanic Acid (N) +0.2 -0.2 -0.0 +0.2 +0.2
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.1 -0.1 +0.0 +0.3 +0.3
stress Rifampicin 0.005 mg/ml +0.2 -0.2 +0.0 +0.4 +0.3
stress Gentamicin 0.006 mg/ml +0.1 -0.2 +0.1 +0.5 +0.2
carbon source L-Ornithine +0.2 +0.0 -0.1 +0.5 +0.2
stress Spectinomycin 0.15 mg/ml +0.2 +0.2 -0.1 +0.4 +0.1
stress Nickel (II) chloride 0.625 mM -0.1 +0.3 +0.1 +0.2 +0.3
motility outer cut, LB soft agar motility assay +0.1 -0.0 -0.1 +1.1 +0.1
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