Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_17765 and AO353_17770 are separated by 12 nucleotidesAO353_17770 and AO353_17775 overlap by 4 nucleotidesAO353_17775 and AO353_17780 are separated by 500 nucleotidesAO353_17780 and AO353_17785 are separated by 548 nucleotides AO353_17765: AO353_17765 - taurine catabolism dioxygenase TauD, at 3,914,080 to 3,914,949 _17765 AO353_17770: AO353_17770 - hypothetical protein, at 3,914,962 to 3,916,494 _17770 AO353_17775: AO353_17775 - hypothetical protein, at 3,916,491 to 3,917,099 _17775 AO353_17780: AO353_17780 - hypothetical protein, at 3,917,600 to 3,918,523 _17780 AO353_17785: AO353_17785 - hypothetical protein, at 3,919,072 to 3,919,263 _17785
Group Condition AO353_17765 AO353_17770 AO353_17775 AO353_17780 AO353_17785
carbon source Tween 20 (C) -0.2 +0.2 -0.0 +0.1 -1.8
carbon source m-Inositol (C) +0.1 +0.1 +0.1 +0.1 -1.9
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.1 +0.2 -0.5 -0.3 -0.7
nitrogen source L-Glutamic (N) +0.0 +0.1 -0.1 -0.1 -1.4
carbon source L-Isoleucine (C) +0.3 -0.0 -0.2 -0.0 -1.3
motility outer cut, LB soft agar motility assay +0.4 -0.1 -0.1 -0.4 -1.0
nitrogen source D-Glucosamine Hydrochloride (N) +0.2 -0.1 +0.1 +0.1 -1.2
stress Furfuryl Alcohol 0.25 vol% -0.2 +0.2 -0.2 -0.0 -0.7
carbon source L-Citrulline -0.1 +0.1 +0.1 -0.2 -0.9
stress copper (II) chloride 2.5 mM +0.0 +0.0 +0.2 -0.1 -1.1
stress Chloride 500 mM -0.3 +0.0 -0.0 +0.2 -0.8
carbon source L-Aspartic Acid (C) +0.3 +0.1 -0.5 +0.2 -0.8
carbon source L-Tryptophan (C) +0.3 +0.1 +0.3 -0.1 -1.3
stress sodium fluoride 6.25 mM +0.1 -0.4 +0.2 -0.0 -0.5
stress methylglyoxal 0.008 vol% -0.1 -0.1 +0.3 -0.5 -0.2
denitrifying Nitrate reduction, replicate B -0.2 -0.2 -0.2 -0.4 +0.6
carbon source L-Malic (C) +0.1 +0.2 -0.1 +0.2 -0.6
carbon source acetate (C) +0.0 -0.4 +0.6 +0.0 -0.2
lb LB -0.2 -0.0 -0.1 +0.2 +0.6
carbon source Fumarate (C) +0.3 -0.3 +0.1 -0.1 +0.5
stress Tetracycline 0.0016 mg/ml -0.3 +0.2 +0.4 +0.3 -0.1
stress acetate 68 mM -0.4 +0.3 +0.1 +0.1 +0.5
carbon source L-Ornithine -0.2 +0.0 +0.1 -0.1 +0.9
pH Minimal media pH9 +0.1 -0.2 +0.3 +0.2 +0.4
stress Cobalt chloride 0.32 mM +0.1 -0.2 +0.2 +0.1 +0.7
nitrogen source Gly-Glu (N) +0.3 -0.1 +0.1 -0.1 +0.7
carbon source D-Glucose +0.1 +0.1 +0.3 -0.1 +0.6
stress Cisplatin 0.006 mg/ml -0.1 +0.4 -0.0 +0.4 +0.3
stress Cisplatin 0.006 mg/ml +0.3 +0.1 +0.3 -0.0 +0.7
carbon source L-Ornithine +0.3 +0.3 +0.1 +0.3 +0.5
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