Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_17490 and AO353_17495 overlap by 4 nucleotidesAO353_17495 and AO353_17500 are separated by 6 nucleotidesAO353_17500 and AO353_17505 are separated by 33 nucleotidesAO353_17505 and AO353_17510 are separated by 44 nucleotides AO353_17490: AO353_17490 - cytochrome C oxidase, at 3,861,113 to 3,862,888 _17490 AO353_17495: AO353_17495 - cytochrome C oxidase subunit III, at 3,862,885 to 3,863,577 _17495 AO353_17500: AO353_17500 - bb3-type cytochrome oxidase subunit IV, at 3,863,584 to 3,864,297 _17500 AO353_17505: AO353_17505 - cytochrome C oxidase subunit IV, at 3,864,331 to 3,864,648 _17505 AO353_17510: AO353_17510 - NAD/FAD-utilizing enzyme apparently involved in cell division, at 3,864,693 to 3,865,253 _17510
Group Condition AO353_17490 AO353_17495 AO353_17500 AO353_17505 AO353_17510
stress sodium fluoride 6.25 mM +0.0 -0.0 -0.5 -0.2 -0.4
nitrogen source L-tyrosine (N) -0.0 +0.1 -0.0 -0.6 -0.2
carbon source L-Citrulline +0.0 +0.1 -0.0 -0.6 -0.3
stress Cisplatin 0.006 mg/ml -0.1 +0.0 -0.5 -0.3 +0.1
nitrogen source Carnitine Hydrochloride (N) +0.0 +0.1 -0.2 -0.5 -0.0
carbon source L-Leucine (C) -0.1 +0.2 -0.3 -0.2 -0.1
carbon source L-Ornithine -0.1 -0.1 -0.3 -0.1 +0.2
nitrogen source Inosine (N) +0.1 +0.2 -0.2 -0.1 -0.3
carbon source D-Serine (C) +0.1 +0.3 -0.5 +0.0 -0.2
motility outer cut, LB soft agar motility assay +0.0 +0.4 -0.2 -0.3 -0.1
carbon source L-Ornithine +0.0 -0.1 -0.5 +0.3 -0.0
stress acetate 68 mM -0.1 -0.1 -0.5 +0.4 +0.2
carbon source L-Citrulline +0.1 -0.1 +0.1 +0.3 -0.4
stress methylglyoxal 0.009 vol% +0.1 -0.1 +0.3 -0.3 -0.0
stress Thallium(I) acetate 0.008 mg/ml +0.1 -0.2 -0.2 +0.4 -0.0
nitrogen source Ammonium chloride (N) +0.1 +0.3 +0.0 -0.3 +0.1
lb LB -0.0 -0.2 -0.0 +0.3 +0.3
nitrogen source L-Arginine (N) +0.0 +0.3 -0.1 -0.2 +0.3
stress Cisplatin 0.006 mg/ml -0.1 +0.2 -0.2 +0.4 -0.1
carbon source acetate (C) -0.1 +0.4 +0.0 +0.3 -0.3
stress Lomefloxacin 0.001 mM -0.0 +0.3 +0.1 -0.3 +0.4
stress Benzalkonium Chloride 0.012 mg/ml +0.1 -0.2 +0.0 +0.4 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.1 +0.2 -0.5 +0.3 +0.5
stress Tetracycline 0.0016 mg/ml -0.1 +0.0 +0.6 +0.2 -0.0
stress Sisomicin 0.008 mg/ml -0.0 +0.3 +0.2 -0.2 +0.4
stress acetate 17 mM -0.0 +0.1 -0.1 +0.3 +0.4
carbon source L-Valine (C) -0.0 +0.3 +0.2 +0.2 +0.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.2 +0.2 -0.2 +0.4
denitrifying Nitrate reduction, replicate B +0.0 -0.1 +0.3 +0.5 +0.2
motility outer cut, LB soft agar motility assay +0.1 +0.2 +0.1 +0.5 +0.2
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