Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_17200 and AO353_17205 overlap by 1 nucleotidesAO353_17205 and AO353_17210 are separated by 39 nucleotidesAO353_17210 and AO353_17215 are separated by 1 nucleotidesAO353_17215 and AO353_17220 are separated by 254 nucleotides AO353_17200: AO353_17200 - 3-oxoadipate CoA-transferase subunit B (EC 2.8.3.6) (from data), at 3,803,571 to 3,804,350 _17200 AO353_17205: AO353_17205 - beta-ketoadipyl CoA thiolase, at 3,804,350 to 3,805,552 _17205 AO353_17210: AO353_17210 - protocatechuate 3,4-dioxygenase, at 3,805,592 to 3,806,296 _17210 AO353_17215: AO353_17215 - protocatechuate 3,4-dioxygenase, at 3,806,298 to 3,806,864 _17215 AO353_17220: AO353_17220 - alpha-ketoglutarate permease, at 3,807,119 to 3,808,414 _17220
Group Condition AO353_17200 AO353_17205 AO353_17210 AO353_17215 AO353_17220
carbon source L-Tryptophan (C) -2.5 -2.4 +0.3 -0.0 -0.8
carbon source L-Ornithine +0.5 -3.8 +0.0 -0.8 +0.0
nitrogen source Parabanic Acid (N) +0.2 -3.9 +0.0 +0.2 -0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.0 -2.0 +0.2 -1.2 +0.1
stress Sisomicin 0.008 mg/ml -0.3 -0.9 -0.6 -0.3 -0.1
stress Lomefloxacin 0.001 mM -0.7 -0.6 +0.0 -0.1 -0.3
carbon source m-Inositol (C) -0.5 -0.9 +0.1 +0.1 -0.1
carbon source butyrate (C) -0.2 -1.2 -0.1 +0.3 +0.0
carbon source Glycerol (C) -0.3 -1.0 -0.0 +0.2 -0.0
carbon source Carnitine Hydrochloride (C) -0.5 -1.0 +0.3 +0.1 +0.0
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -1.3 +0.4 +0.2 +0.0
stress Paraquat dichloride 0.032 mg/mL -0.8 -0.4 -0.1 +0.3 +0.0
survival 4C survival; 360 hrs +0.2 -0.5 +0.3 -0.4 -0.2
carbon source L-Citrulline +0.5 -0.8 -0.4 +0.1 +0.1
carbon source acetate (C) -0.8 -0.4 +0.2 +0.3 +0.1
stress Cisplatin 0.006 mg/ml -0.3 +1.0 -0.3 -0.7 -0.0
carbon source L-Valine (C) -0.2 +1.0 -0.4 -0.0 -0.1
anaerobic Anaerobic, acetate donor; nitrate and iron -1.6 +0.8 +0.5 +0.6 +0.3
stress methylglyoxal 0.008 vol% -0.2 +1.1 +0.3 -0.2 -0.1
survival 4C survival; 672 hrs +0.8 +0.0 +0.5 -0.2 -0.1
carbon source L-Ornithine +0.4 +1.4 -0.2 -0.3 +0.0
carbon source D-Glucose +0.5 +0.4 -0.1 +0.4 +0.2
carbon source L-Citrulline +0.4 +0.6 +0.6 -0.3 +0.1
carbon source Cytidine (C) +0.5 +0.7 +0.1 +0.1 -0.0
carbon source D-Glucose +0.4 +0.7 +0.4 -0.2 +0.2
lb LB +0.4 +1.1 +0.1 -0.0 +0.0
carbon source L-Citrulline +0.8 +0.8 -0.3 +0.6 -0.1
carbon source L-Citrulline +0.3 +1.1 +0.1 +0.4 -0.0
carbon source D-Ribose (C) +0.7 +1.3 -0.0 +0.0 +0.1
carbon source D-Ribose (C) +1.0 +1.5 +0.2 -0.1 +0.1
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