Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_17005 and AO353_17010 overlap by 8 nucleotidesAO353_17010 and AO353_17015 are separated by 187 nucleotidesAO353_17015 and AO353_17020 are separated by 99 nucleotidesAO353_17020 and AO353_17025 are separated by 95 nucleotides AO353_17005: AO353_17005 - hypothetical protein, at 3,759,397 to 3,759,675 _17005 AO353_17010: AO353_17010 - collagen pro alpha-chain precursor, at 3,759,668 to 3,760,426 _17010 AO353_17015: AO353_17015 - hypothetical protein, at 3,760,614 to 3,761,078 _17015 AO353_17020: AO353_17020 - ATP-dependent DNA helicase DinG, at 3,761,178 to 3,763,322 _17020 AO353_17025: AO353_17025 - beta-agarase, at 3,763,418 to 3,765,820 _17025
Group Condition AO353_17005 AO353_17010 AO353_17015 AO353_17020 AO353_17025
motility outer cut, LB soft agar motility assay -1.1 -0.7 +0.3 -0.9 -1.9
stress methylglyoxal 0.008 vol% -0.7 -0.2 -0.3 -2.0 +0.0
motility outer cut, LB soft agar motility assay -0.1 -0.2 +0.2 -0.7 -1.8
survival 4C survival; 672 hrs +0.5 -0.1 +0.1 -0.9 -1.7
stress Cisplatin 0.006 mg/ml -0.5 -0.0 -0.3 -2.2 +0.9
survival 4C survival; 192 hrs -0.1 -0.2 -0.1 -0.4 -0.9
carbon source Ethanol (C) -1.1 -0.0 -0.3 -0.1 -0.1
pH Minimal media pH9 -0.2 -0.2 -1.0 -0.0 -0.3
survival 4C survival; 360 hrs +0.6 -0.3 +0.1 -0.3 -1.4
carbon source L-Phenylalanine (C) +0.0 -0.6 -0.5 -0.4 +0.3
stress copper (II) chloride 2.5 mM +0.2 -0.3 -0.5 -0.3 -0.3
nitrogen source L-Serine (N) -1.5 +0.1 +0.2 -0.0 +0.1
stress Lomefloxacin 0.001 mM +0.9 -0.1 -0.3 -1.7 +0.3
motility outer cut, LB soft agar motility assay +1.2 -0.0 +0.2 -0.2 -2.0
stress Cisplatin 0.006 mg/ml +0.5 +0.3 +0.2 -2.6 +0.7
stress sodium fluoride 6.25 mM -0.7 -0.4 +0.2 +0.3 -0.1
stress Tetracycline 0.0016 mg/ml -0.8 -0.1 -0.5 +0.2 +0.8
stress Cholin acetate 19 mM +0.8 -0.0 -0.2 -0.3 -0.6
stress acetate 68 mM +0.7 +0.4 -0.0 -0.2 -0.8
stress acetate 17 mM +0.9 -0.2 +0.2 -0.3 -0.4
stress Fusidic 0.125 mg/ml -0.2 +0.2 -0.3 -0.4 +1.2
carbon source propionate (C) +0.6 +0.3 +0.5 -0.1 -0.8
stress Choline Lysine 12 mM +0.8 +0.1 +0.4 -0.2 -0.5
stress 1-ethyl-3-methylimidazolium acetate 30 mM +1.0 +0.1 +0.3 -0.1 -0.6
stress 1-ethyl-3-methylimidazolium acetate 20 mM +0.6 +0.3 +0.4 -0.1 -0.5
stress methylglyoxal 0.009 vol% +0.7 +0.3 -0.2 -0.5 +1.0
nitrogen source L-tyrosine (N) +0.3 +0.4 -0.2 -0.0 +1.0
stress Nalidixic 0.004 mg/ml +0.5 +0.4 +0.0 +0.6 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.2 +0.6 +0.3 -0.1 +0.8
stress Benzalkonium Chloride 0.012 mg/ml +0.7 +0.3 +0.1 +0.3 +0.7
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