Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_16715 and AO353_16720 are separated by 9 nucleotidesAO353_16720 and AO353_16725 are separated by 124 nucleotidesAO353_16725 and AO353_16730 overlap by 4 nucleotidesAO353_16730 and AO353_16735 overlap by 1 nucleotides AO353_16715: AO353_16715 - phage tail protein, at 3,707,515 to 3,707,727 _16715 AO353_16720: AO353_16720 - phage tail protein, at 3,707,737 to 3,708,765 _16720 AO353_16725: AO353_16725 - hypothetical protein, at 3,708,890 to 3,709,474 _16725 AO353_16730: AO353_16730 - hypothetical protein, at 3,709,471 to 3,709,653 _16730 AO353_16735: AO353_16735 - phage tail protein, at 3,709,653 to 3,711,149 _16735
Group Condition AO353_16715 AO353_16720 AO353_16725 AO353_16730 AO353_16735
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. -0.4 -0.5 N.D. -0.7
motility outer cut, LB soft agar motility assay N.D. -0.2 -1.0 N.D. -0.0
carbon source L-Ornithine N.D. -0.3 -0.3 N.D. -0.3
carbon source L-Tryptophan (C) N.D. +0.1 -0.9 N.D. -0.0
carbon source L-Alanine (C) N.D. -0.1 -0.5 N.D. -0.2
stress Rifampicin 0.005 mg/ml N.D. -0.1 -0.7 N.D. +0.0
stress 1-ethyl-3-methylimidazolium acetate 30 mM N.D. -0.4 -0.4 N.D. +0.0
stress acetate 68 mM N.D. -0.0 -0.3 N.D. -0.4
motility outer cut, LB soft agar motility assay N.D. -0.7 -0.3 N.D. +0.3
carbon source succinate (C) N.D. -0.2 -0.4 N.D. -0.2
motility outer cut, LB soft agar motility assay N.D. +0.0 -1.2 N.D. +0.6
carbon source L-Citrulline N.D. +0.1 -0.6 N.D. -0.0
stress Ceftazidime 0.12 mg/ml N.D. +0.1 -0.3 N.D. -0.3
carbon source Ethanol (C) N.D. -0.0 -0.5 N.D. +0.1
denitrifying Nitrate reduction, replicate C N.D. +0.1 -0.2 N.D. -0.3
carbon source L-Glutamine (C) N.D. +0.1 -0.4 N.D. -0.2
stress Doxycycline hyclate 0.0006 mg/ml N.D. +0.5 -1.0 N.D. +0.2
carbon source D-Glucose N.D. -0.2 +0.2 N.D. -0.2
stress A22 0.01 mg/ml N.D. -0.2 +0.3 N.D. -0.3
carbon source L-Citrulline N.D. +0.0 -0.5 N.D. +0.3
carbon source L-Phenylalanine (C) N.D. -0.4 -0.1 N.D. +0.3
stress Cisplatin 0.006 mg/ml N.D. +0.2 -0.6 N.D. +0.2
stress Doxycycline hyclate 0.0002 mg/ml N.D. -0.4 +0.5 N.D. -0.3
stress 1-ethyl-3-methylimidazolium chloride 170 mM N.D. -0.3 +0.4 N.D. -0.1
carbon source L-Leucine (C) N.D. -0.2 +0.5 N.D. -0.2
stress Cholin acetate 10 mM N.D. +0.3 +0.4 N.D. -0.0
stress copper (II) chloride 2.5 mM N.D. -0.0 +0.5 N.D. +0.2
survival 4C survival; 672 hrs N.D. -0.1 +0.8 N.D. +0.3
carbon source L-Serine (C) N.D. +0.1 +0.8 N.D. +0.1
stress Sisomicin 0.008 mg/ml N.D. -0.0 +1.2 N.D. +0.0
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