Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_16585 and AO353_16590 are separated by 42 nucleotidesAO353_16590 and AO353_16595 overlap by 4 nucleotidesAO353_16595 and AO353_16600 overlap by 13 nucleotidesAO353_16600 and AO353_16605 overlap by 1 nucleotides AO353_16585: AO353_16585 - S-formylglutathione hydrolase, at 3,684,915 to 3,685,760 _16585 AO353_16590: AO353_16590 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 3,685,803 to 3,686,276 _16590 AO353_16595: AO353_16595 - pseudouridine synthase, at 3,686,273 to 3,687,331 _16595 AO353_16600: AO353_16600 - stationary phase survival protein SurE, at 3,687,319 to 3,688,068 _16600 AO353_16605: AO353_16605 - protein-L-isoaspartate O-methyltransferase, at 3,688,068 to 3,688,745 _16605
Group Condition AO353_16585 AO353_16590 AO353_16595 AO353_16600 AO353_16605
stress methylglyoxal 0.009 vol% -2.7 N.D. -0.5 -1.0 -1.4
stress methylglyoxal 0.008 vol% -2.8 N.D. -0.0 -0.9 -0.5
stress Furfuryl Alcohol 0.25 vol% -2.5 N.D. -0.2 -0.2 -0.3
carbon source propionate (C) -0.5 N.D. -0.3 -0.6 -1.2
carbon source Carnitine Hydrochloride (C) -0.4 N.D. -0.4 -0.6 -1.1
carbon source propionate (C) -0.2 N.D. -0.4 -0.9 -1.0
survival 4C survival; 672 hrs -0.3 N.D. -0.5 -0.8 -0.8
carbon source L-Phenylalanine (C) -0.4 N.D. -0.1 -1.2 -0.6
carbon source L-Ornithine -0.2 N.D. -0.3 -0.6 -1.2
stress Lomefloxacin 0.001 mM +0.1 N.D. +0.0 -1.4 -1.0
carbon source Trisodium citrate (C) -0.3 N.D. -0.5 -0.4 -1.0
carbon source Putrescine (C) +0.1 N.D. -0.6 -0.9 -0.7
stress Tetracycline 0.0016 mg/ml -0.1 N.D. +0.0 -1.2 -0.8
carbon source D-Lactate (C) -0.1 N.D. -0.4 -0.7 -0.8
carbon source L-Citrulline (C) -0.0 N.D. -0.3 -0.6 -1.0
carbon source Trisodium citrate (C) -0.2 N.D. -0.3 -0.6 -0.9
carbon source L-Valine (C) -0.0 N.D. -0.5 -0.6 -0.8
stress Cisplatin 0.006 mg/ml -0.0 N.D. -0.2 -0.8 -0.9
stress Rifampicin 0.005 mg/ml +0.2 N.D. +0.1 -0.8 -1.4
motility outer cut, LB soft agar motility assay -0.2 N.D. +0.3 -1.1 -0.8
stress Doxycycline hyclate 0.0006 mg/ml -0.1 N.D. -0.1 -0.8 -0.8
carbon source Tween 20 (C) -0.0 N.D. -0.2 -0.7 -1.0
carbon source L-Citrulline -0.3 N.D. +0.0 -0.8 -0.7
carbon source L-Asparagine (C) +0.1 N.D. -0.4 -0.6 -0.7
stress Cisplatin 0.006 mg/ml -0.4 N.D. +0.5 -0.8 -0.8
carbon source L-Citrulline +0.3 N.D. -0.1 -0.8 -0.7
motility outer cut, LB soft agar motility assay -0.4 N.D. +0.7 -1.0 -0.5
stress Sisomicin 0.008 mg/ml +0.2 N.D. +0.3 +0.7 +1.1
stress A22 0.002 mg/ml +0.1 N.D. +0.4 +1.1 +0.9
stress A22 0.01 mg/ml +0.2 N.D. +1.1 +1.9 +2.0
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