Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_16565 and AO353_16570 overlap by 4 nucleotidesAO353_16570 and AO353_16575 are separated by 621 nucleotidesAO353_16575 and AO353_16580 are separated by 106 nucleotidesAO353_16580 and AO353_16585 are separated by 8 nucleotides AO353_16565: AO353_16565 - cell division protein FtsB, at 3,681,187 to 3,681,465 _16565 AO353_16570: AO353_16570 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 3,681,462 to 3,682,169 _16570 AO353_16575: AO353_16575 - LysR family transcriptional regulator, at 3,682,791 to 3,683,687 _16575 AO353_16580: AO353_16580 - S-(hydroxymethyl)glutathione dehydrogenase, at 3,683,794 to 3,684,906 _16580 AO353_16585: AO353_16585 - S-formylglutathione hydrolase, at 3,684,915 to 3,685,760 _16585
Group Condition AO353_16565 AO353_16570 AO353_16575 AO353_16580 AO353_16585
stress methylglyoxal 0.009 vol% N.D. N.D. -0.8 -1.6 -2.7
stress methylglyoxal 0.008 vol% N.D. N.D. -0.8 -1.3 -2.8
stress Furfuryl Alcohol 0.25 vol% N.D. N.D. -0.8 -1.2 -2.5
nitrogen source Carnitine Hydrochloride (N) N.D. N.D. -0.5 -0.8 -0.6
carbon source Carnitine Hydrochloride (C) N.D. N.D. -0.4 -0.8 -0.4
stress Furfuryl Alcohol 0.0625 vol% N.D. N.D. -0.1 -0.4 -1.0
stress Furfuryl Alcohol 0.125 vol% N.D. N.D. -0.3 -0.5 -0.6
pH Minimal media pH9 N.D. N.D. +0.4 -1.0 -0.6
carbon source propionate (C) N.D. N.D. +0.1 -0.7 -0.5
stress Fusidic 0.125 mg/ml N.D. N.D. -0.4 -0.6 +0.1
carbon source propionate (C) N.D. N.D. -0.1 -0.5 -0.2
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.3 -0.2 -0.4
motility outer cut, LB soft agar motility assay N.D. N.D. -0.1 -0.3 -0.4
motility outer cut, LB soft agar motility assay N.D. N.D. +0.0 -0.3 -0.4
carbon source acetate (C) N.D. N.D. -0.0 -0.9 +0.2
carbon source Trisodium citrate (C) N.D. N.D. -0.1 -0.3 -0.2
carbon source L-Ornithine N.D. N.D. +0.0 -0.5 -0.2
carbon source Trisodium citrate (C) N.D. N.D. -0.1 -0.2 -0.3
carbon source L-Phenylalanine (C) N.D. N.D. +0.1 -0.2 -0.4
pH Minimal media pH9 N.D. N.D. -0.1 -0.3 -0.2
stress nitrite 10 mM N.D. N.D. -0.2 -0.2 -0.2
stress Chloride 500 mM N.D. N.D. +0.1 -0.3 -0.3
stress Doxycycline hyclate 0.0006 mg/ml N.D. N.D. +0.1 -0.4 -0.1
carbon source L-Isoleucine (C) N.D. N.D. -0.2 +0.2 -0.2
stress acetate 34 mM N.D. N.D. +0.1 -0.4 +0.1
survival 4C survival; 672 hrs N.D. N.D. +0.2 -0.1 -0.3
carbon source L-Citrulline N.D. N.D. +0.3 -0.5 +0.3
carbon source acetate (C) N.D. N.D. +0.3 -0.2 +0.3
carbon source L-Citrulline N.D. N.D. +0.2 +0.4 -0.2
stress Benzalkonium Chloride 0.012 mg/ml N.D. N.D. +0.2 +0.4 +0.1
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