Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_16480 and AO353_16485 overlap by 1 nucleotidesAO353_16485 and AO353_16490 overlap by 4 nucleotidesAO353_16490 and AO353_16495 are separated by 54 nucleotidesAO353_16495 and AO353_16500 are separated by 74 nucleotides AO353_16480: AO353_16480 - farnesyl-diphosphate synthase, at 3,659,095 to 3,659,850 _16480 AO353_16485: AO353_16485 - phosphatidate cytidylyltransferase, at 3,659,850 to 3,660,656 _16485 AO353_16490: AO353_16490 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 3,660,653 to 3,661,843 _16490 AO353_16495: AO353_16495 - zinc metallopeptidase RseP, at 3,661,898 to 3,663,250 _16495 AO353_16500: AO353_16500 - outer membrane protein assembly factor BamA, at 3,663,325 to 3,665,724 _16500
Group Condition AO353_16480 AO353_16485 AO353_16490 AO353_16495 AO353_16500
stress Fusidic 0.125 mg/ml N.D. N.D. N.D. -2.8 N.D.
stress Cisplatin 0.006 mg/ml N.D. N.D. N.D. -2.6 N.D.
carbon source propionate (C) N.D. N.D. N.D. -2.6 N.D.
stress nitrate 200 mM N.D. N.D. N.D. -2.5 N.D.
stress Doxycycline hyclate 0.0006 mg/ml N.D. N.D. N.D. -2.5 N.D.
anaerobic N1B4wt with N2E3m denitrifying replicate C N.D. N.D. N.D. -2.4 N.D.
stress Cisplatin 0.006 mg/ml N.D. N.D. N.D. -2.3 N.D.
stress Benzalkonium Chloride 0.012 mg/ml N.D. N.D. N.D. -2.3 N.D.
stress Rifampicin 0.005 mg/ml N.D. N.D. N.D. -2.2 N.D.
stress Polymyxin B sulfate 4 mg/ml N.D. N.D. N.D. -2.2 N.D.
stress Spectinomycin 0.2 mg/ml N.D. N.D. N.D. -2.2 N.D.
carbon source L-Leucine (C) N.D. N.D. N.D. -2.0 N.D.
stress Spectinomycin 0.15 mg/ml N.D. N.D. N.D. -1.9 N.D.
stress methylglyoxal 0.009 vol% N.D. N.D. N.D. -1.9 N.D.
stress copper (II) chloride 2.5 mM N.D. N.D. N.D. -1.9 N.D.
carbon source L-Proline (C) N.D. N.D. N.D. -1.8 N.D.
carbon source L-Isoleucine (C) N.D. N.D. N.D. -1.8 N.D.
carbon source propionate (C) N.D. N.D. N.D. -1.7 N.D.
stress Lomefloxacin 0.001 mM N.D. N.D. N.D. -1.7 N.D.
carbon source acetate (C) N.D. N.D. N.D. -1.7 N.D.
stress Chloride 500 mM N.D. N.D. N.D. -1.7 N.D.
carbon source L-Valine (C) N.D. N.D. N.D. -1.6 N.D.
carbon source L-Phenylalanine (C) N.D. N.D. N.D. -1.6 N.D.
pH Minimal media pH9 N.D. N.D. N.D. -1.5 N.D.
carbon source L-Proline (C) N.D. N.D. N.D. -1.5 N.D.
stress acetate 17 mM N.D. N.D. N.D. +1.5 N.D.
stress acetate 34 mM N.D. N.D. N.D. +1.6 N.D.
stress Cholin acetate 38 mM N.D. N.D. N.D. +1.6 N.D.
stress Cholin acetate 19 mM N.D. N.D. N.D. +1.9 N.D.
survival 4C survival; 672 hrs N.D. N.D. N.D. +2.4 N.D.
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