Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_16315 and AO353_16320 are separated by 93 nucleotidesAO353_16320 and AO353_16325 are separated by 281 nucleotidesAO353_16325 and AO353_16330 overlap by 1 nucleotidesAO353_16330 and AO353_16335 are separated by 32 nucleotides AO353_16315: AO353_16315 - adenylate kinase, at 3,622,897 to 3,623,544 _16315 AO353_16320: AO353_16320 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaB, at 3,623,638 to 3,624,312 _16320 AO353_16325: AO353_16325 - hypothetical protein, at 3,624,594 to 3,624,902 _16325 AO353_16330: AO353_16330 - hypothetical protein, at 3,624,902 to 3,625,762 _16330 AO353_16335: AO353_16335 - 2-methylisocitrate lyase, at 3,625,795 to 3,626,616 _16335
Group Condition AO353_16315 AO353_16320 AO353_16325 AO353_16330 AO353_16335
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.4 -0.3 -0.6
stress Sisomicin 0.008 mg/ml N.D. N.D. -0.3 -0.5 -0.5
stress Doxycycline hyclate 0.0006 mg/ml N.D. N.D. -0.8 +0.1 -0.5
carbon source L-Leucine (C) N.D. N.D. -0.7 -0.1 -0.1
carbon source L-Citrulline N.D. N.D. -0.3 +0.1 -0.7
stress A22 0.002 mg/ml N.D. N.D. -0.4 -0.1 -0.2
carbon source L-Citrulline N.D. N.D. -0.6 -0.3 +0.1
carbon source Cytidine (C) N.D. N.D. -0.2 -0.2 -0.4
nitrogen source nitrate (N) N.D. N.D. -0.4 -0.1 -0.2
stress sodium fluoride 6.25 mM N.D. N.D. -0.2 +0.1 -0.5
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.3 +0.2 -0.5
pH Minimal media pH7 N.D. N.D. -0.2 +0.2 -0.4
carbon source acetate (C) N.D. N.D. -0.7 +0.5 -0.2
stress Furfuryl Alcohol 0.0625 vol% N.D. N.D. +0.2 -0.3 -0.4
stress Thallium(I) acetate 0.016 mg/ml N.D. N.D. -0.0 +0.2 -0.5
carbon source Ethanol (C) N.D. N.D. +0.3 -0.3 -0.2
carbon source D-Glucose N.D. N.D. -0.6 +0.0 +0.3
denitrifying Nitrate reduction, replicate C N.D. N.D. -0.5 +0.0 +0.4
carbon source L-Ornithine N.D. N.D. -0.3 +0.3 +0.2
carbon source L-Ornithine N.D. N.D. -0.4 +0.2 +0.4
pH Minimal media pH9 N.D. N.D. +0.2 -0.3 +0.3
nitrogen source Gly-Glu (N) N.D. N.D. +0.3 +0.3 -0.3
carbon source D-Glucose N.D. N.D. -0.3 +0.2 +0.4
carbon source L-Citrulline N.D. N.D. -0.2 -0.0 +0.5
stress Cobalt chloride 0.32 mM N.D. N.D. +0.5 -0.1 +0.1
survival 4C survival; 192 hrs N.D. N.D. +0.4 +0.3 -0.1
stress Benzalkonium Chloride 0.012 mg/ml N.D. N.D. +0.4 +0.0 +0.3
survival 4C survival; 360 hrs N.D. N.D. +0.7 +0.5 -0.2
denitrifying Nitrate reduction, replicate B N.D. N.D. +0.3 +0.5 +0.2
survival 4C survival; 672 hrs N.D. N.D. +1.0 +0.3 -0.0
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