Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15870 and AO353_15875 are separated by 28 nucleotidesAO353_15875 and AO353_15880 are separated by 12 nucleotidesAO353_15880 and AO353_15885 overlap by 1 nucleotidesAO353_15885 and AO353_15890 are separated by 3 nucleotides AO353_15870: AO353_15870 - nucleoside diphosphate kinase, at 3,502,475 to 3,502,900 _15870 AO353_15875: AO353_15875 - 23S rRNA (adenine(2503)-C2)-methyltransferase, at 3,502,929 to 3,504,077 _15875 AO353_15880: AO353_15880 - pilus assembly protein PilW, at 3,504,090 to 3,504,848 _15880 AO353_15885: AO353_15885 - Cro/Cl family transcriptional regulator, at 3,504,848 to 3,505,876 _15885 AO353_15890: AO353_15890 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, at 3,505,880 to 3,506,989 _15890
Group Condition AO353_15870 AO353_15875 AO353_15880 AO353_15885 AO353_15890
motility outer cut, LB soft agar motility assay N.D. -0.7 -0.1 -1.2 N.D.
carbon source acetate (C) N.D. -1.2 -0.1 -0.6 N.D.
temperature LB 30C N.D. -1.2 -0.1 -0.5 N.D.
stress Chloride 500 mM N.D. -0.7 -0.3 -0.7 N.D.
stress nitrate 200 mM N.D. -1.8 +0.3 -0.2 N.D.
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.4 -0.9 -0.3 N.D.
carbon source acetate (C) N.D. -1.4 +0.1 -0.2 N.D.
survival 4C survival; 360 hrs N.D. +0.1 -0.2 -1.4 N.D.
carbon source propionate (C) N.D. +0.1 -0.4 -1.1 N.D.
survival 4C survival; 672 hrs N.D. +0.2 +0.0 -1.6 N.D.
stress perchlorate 75 mM N.D. -1.0 +0.5 -0.4 N.D.
carbon source L-Citrulline N.D. -0.3 -0.7 +0.6 N.D.
carbon source L-Serine (C) N.D. -0.6 -0.4 +0.7 N.D.
carbon source D-Glucose N.D. -0.1 -0.8 +0.9 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. +0.5 +0.5 -0.8 N.D.
carbon source L-Citrulline N.D. -0.5 -0.5 +1.2 N.D.
carbon source L-Ornithine N.D. -0.5 -0.3 +1.4 N.D.
stress Cisplatin 0.006 mg/ml N.D. -0.4 -0.5 +1.9 N.D.
stress Cisplatin 0.006 mg/ml N.D. -0.0 -0.4 +1.4 N.D.
stress Cobalt chloride 0.32 mM N.D. +1.0 -0.3 +0.4 N.D.
carbon source L-Ornithine N.D. +0.6 -0.5 +1.5 N.D.
stress Rifampicin 0.005 mg/ml N.D. +0.7 +0.1 +0.9 N.D.
carbon source L-Ornithine N.D. +0.7 -0.2 +1.5 N.D.
stress methylglyoxal 0.009 vol% N.D. +0.2 +0.4 +1.7 N.D.
carbon source L-Ornithine N.D. +1.0 -0.2 +1.6 N.D.
stress Tetracycline 0.0016 mg/ml N.D. +0.8 -0.1 +1.7 N.D.
stress Fusidic 0.125 mg/ml N.D. +0.9 +0.5 +1.4 N.D.
stress Lomefloxacin 0.001 mM N.D. +1.4 +0.6 +1.3 N.D.
stress Doxycycline hyclate 0.0006 mg/ml N.D. +1.9 +0.6 +2.1 N.D.
stress Sisomicin 0.008 mg/ml N.D. +2.9 +1.6 +1.3 N.D.
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