Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15865 and AO353_15870 are separated by 90 nucleotidesAO353_15870 and AO353_15875 are separated by 28 nucleotidesAO353_15875 and AO353_15880 are separated by 12 nucleotidesAO353_15880 and AO353_15885 overlap by 1 nucleotides AO353_15865: AO353_15865 - Fe-S assembly protein IscX, at 3,502,184 to 3,502,384 _15865 AO353_15870: AO353_15870 - nucleoside diphosphate kinase, at 3,502,475 to 3,502,900 _15870 AO353_15875: AO353_15875 - 23S rRNA (adenine(2503)-C2)-methyltransferase, at 3,502,929 to 3,504,077 _15875 AO353_15880: AO353_15880 - pilus assembly protein PilW, at 3,504,090 to 3,504,848 _15880 AO353_15885: AO353_15885 - Cro/Cl family transcriptional regulator, at 3,504,848 to 3,505,876 _15885
Group Condition AO353_15865 AO353_15870 AO353_15875 AO353_15880 AO353_15885
motility outer cut, LB soft agar motility assay N.D. N.D. -0.7 -0.1 -1.2
carbon source acetate (C) N.D. N.D. -1.2 -0.1 -0.6
temperature LB 30C N.D. N.D. -1.2 -0.1 -0.5
stress Chloride 500 mM N.D. N.D. -0.7 -0.3 -0.7
stress nitrate 200 mM N.D. N.D. -1.8 +0.3 -0.2
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. -0.4 -0.9 -0.3
carbon source acetate (C) N.D. N.D. -1.4 +0.1 -0.2
survival 4C survival; 360 hrs N.D. N.D. +0.1 -0.2 -1.4
carbon source propionate (C) N.D. N.D. +0.1 -0.4 -1.1
survival 4C survival; 672 hrs N.D. N.D. +0.2 +0.0 -1.6
stress perchlorate 75 mM N.D. N.D. -1.0 +0.5 -0.4
carbon source L-Citrulline N.D. N.D. -0.3 -0.7 +0.6
carbon source L-Serine (C) N.D. N.D. -0.6 -0.4 +0.7
carbon source D-Glucose N.D. N.D. -0.1 -0.8 +0.9
anaerobic Anaerobic, acetate donor; nitrate and iron N.D. N.D. +0.5 +0.5 -0.8
carbon source L-Citrulline N.D. N.D. -0.5 -0.5 +1.2
carbon source L-Ornithine N.D. N.D. -0.5 -0.3 +1.4
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.4 -0.5 +1.9
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.0 -0.4 +1.4
stress Cobalt chloride 0.32 mM N.D. N.D. +1.0 -0.3 +0.4
carbon source L-Ornithine N.D. N.D. +0.6 -0.5 +1.5
stress Rifampicin 0.005 mg/ml N.D. N.D. +0.7 +0.1 +0.9
carbon source L-Ornithine N.D. N.D. +0.7 -0.2 +1.5
stress methylglyoxal 0.009 vol% N.D. N.D. +0.2 +0.4 +1.7
carbon source L-Ornithine N.D. N.D. +1.0 -0.2 +1.6
stress Tetracycline 0.0016 mg/ml N.D. N.D. +0.8 -0.1 +1.7
stress Fusidic 0.125 mg/ml N.D. N.D. +0.9 +0.5 +1.4
stress Lomefloxacin 0.001 mM N.D. N.D. +1.4 +0.6 +1.3
stress Doxycycline hyclate 0.0006 mg/ml N.D. N.D. +1.9 +0.6 +2.1
stress Sisomicin 0.008 mg/ml N.D. N.D. +2.9 +1.6 +1.3
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