Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15620 and AO353_15625 are separated by 218 nucleotidesAO353_15625 and AO353_15630 are separated by 7 nucleotidesAO353_15630 and AO353_15635 are separated by 131 nucleotidesAO353_15635 and AO353_15640 are separated by 102 nucleotides AO353_15620: AO353_15620 - cytochrome C biogenesis protein, at 3,455,776 to 3,457,587 _15620 AO353_15625: AO353_15625 - methionine sulfoxide reductase A, at 3,457,806 to 3,458,513 _15625 AO353_15630: AO353_15630 - diguanylate cyclase, at 3,458,521 to 3,459,534 _15630 AO353_15635: AO353_15635 - LysR family transcriptional regulator, at 3,459,666 to 3,460,574 _15635 AO353_15640: AO353_15640 - acetylornithine aminotransferase, at 3,460,677 to 3,461,852 _15640
Group Condition AO353_15620 AO353_15625 AO353_15630 AO353_15635 AO353_15640
anaerobic Anaerobic, acetate donor; nitrate and iron +0.4 -0.5 +0.1 +0.0 -2.7
carbon source L-Phenylalanine (C) -0.0 +0.3 +0.2 -0.9 -2.0
stress methylglyoxal 0.009 vol% +0.1 -0.2 -0.3 -0.1 -1.1
stress Fusidic 0.125 mg/ml -0.4 -0.1 -0.1 -0.0 -0.8
temperature LB 30C -0.2 -0.1 +0.1 -0.0 -1.0
stress perchlorate 75 mM -0.1 -0.1 +0.1 -0.1 -0.9
stress Sisomicin 0.008 mg/ml +0.2 -0.2 -0.5 -0.1 -0.4
carbon source D,L-Lactate (C) +0.1 -0.2 -0.1 -0.1 -0.7
nitrogen source Parabanic Acid (N) -0.2 +0.3 -0.1 -0.0 -0.8
carbon source L-Citrulline (C) +0.2 +0.2 -0.2 -0.1 -0.8
motility outer cut, LB soft agar motility assay +0.2 -0.0 +0.6 -0.4 -1.0
nitrogen source NAG (N) +0.1 +0.2 -0.4 -0.0 -0.5
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.2 -0.1 -0.3 +0.4 -0.5
stress Lomefloxacin 0.001 mM -0.1 +0.3 -0.6 +0.3 -0.4
stress Tetracycline 0.0016 mg/ml -0.2 +0.0 -0.7 +0.2 +0.3
nitrogen source Gly-Glu (N) -0.1 +0.3 +0.3 -0.2 -0.5
carbon source acetate (C) +0.3 -0.1 -0.2 +0.4 -0.6
carbon source L-Tryptophan (C) -0.2 +0.4 +0.4 -0.3 -0.4
stress Cisplatin 0.006 mg/ml +0.1 -0.1 +0.7 -0.1 -0.6
carbon source L-Citrulline +0.1 -0.2 +0.8 +0.1 -0.8
motility outer cut, LB soft agar motility assay +0.2 -0.2 +0.4 -0.5 +0.5
carbon source L-Citrulline +0.1 +0.1 -0.2 -0.3 +0.7
carbon source D-Glucose -0.1 +0.2 -0.2 +0.1 +0.7
carbon source L-Alanine (C) +0.3 -0.3 +0.4 -0.0 +0.2
stress Cisplatin 0.006 mg/ml -0.3 +0.4 +0.5 +0.4 -0.1
carbon source L-Ornithine -0.3 +0.2 +0.4 +0.1 +0.4
carbon source L-Citrulline -0.1 -0.2 +0.7 +0.1 +0.4
stress Doxycycline hyclate 0.0002 mg/ml -0.1 +0.5 +0.3 +0.1 +0.4
stress 1-ethyl-3-methylimidazolium acetate 15 mM +0.2 +0.2 -0.1 +0.4 +0.5
motility outer cut, LB soft agar motility assay +0.7 +0.3 +0.6 +0.0 -0.2
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