Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15565 and AO353_15570 are separated by 184 nucleotidesAO353_15570 and AO353_15575 are separated by 101 nucleotidesAO353_15575 and AO353_15580 overlap by 8 nucleotidesAO353_15580 and AO353_15585 are separated by 28 nucleotides AO353_15565: AO353_15565 - hypothetical protein, at 3,445,141 to 3,445,944 _15565 AO353_15570: AO353_15570 - amino acid dehydrogenase, at 3,446,129 to 3,447,148 _15570 AO353_15575: AO353_15575 - pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha, at 3,447,250 to 3,448,347 _15575 AO353_15580: AO353_15580 - 2-oxoisovalerate dehydrogenase, at 3,448,340 to 3,449,326 _15580 AO353_15585: AO353_15585 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 3,449,355 to 3,450,464 _15585
Group Condition AO353_15565 AO353_15570 AO353_15575 AO353_15580 AO353_15585
stress Cisplatin 0.006 mg/ml -0.6 -0.3 -0.0 -0.6 -0.7
carbon source L-Citrulline -0.4 -0.2 -0.1 -0.4 -1.0
stress Cisplatin 0.006 mg/ml -1.0 -0.3 +0.0 -0.3 -0.5
carbon source L-Isoleucine (C) -0.3 -0.5 +0.1 +0.2 -1.1
stress Paraquat dichloride 0.032 mg/mL -0.5 -0.1 -0.2 +0.0 -0.8
carbon source L-Citrulline (C) -0.1 -0.1 -0.3 -0.7 -0.4
stress Thallium(I) acetate 0.016 mg/ml -0.1 +0.1 +0.1 -0.9 -0.7
carbon source L-Ornithine -0.3 +0.0 -0.6 +0.5 -1.0
denitrifying Nitrate reduction, replicate B -1.1 -0.2 +0.2 -0.1 -0.2
stress Spectinomycin 0.2 mg/ml -0.3 +0.0 -0.0 -0.3 -0.7
stress Lomefloxacin 0.001 mM -0.7 -0.0 +0.1 -0.3 -0.2
carbon source L-Phenylalanine (C) +0.2 -0.1 +0.1 -0.5 -0.5
stress Doxycycline hyclate 0.0006 mg/ml -0.3 -0.3 +0.7 +0.1 -0.8
carbon source Ethanol (C) -0.7 +0.1 -0.0 -0.2 +0.3
stress acetate 17 mM +0.2 -0.1 +0.1 -0.4 -0.5
carbon source propionate (C) -0.4 -0.2 -0.4 +0.6 -0.2
nitrogen source Uridine (N) +0.4 -0.3 -0.1 -0.1 -0.5
lb LB +0.4 -0.1 +0.2 -0.4 -0.5
stress methylglyoxal 0.009 vol% -0.1 -0.2 -0.1 +0.5 -0.5
nitrogen source Gly-Glu (N) +0.6 -0.2 -0.1 -0.2 -0.4
motility outer cut, LB soft agar motility assay +0.5 +0.1 +0.2 -0.2 -0.6
carbon source D-Fructose (C) -0.0 +0.2 +0.2 +0.3 -0.6
motility outer cut, LB soft agar motility assay -0.4 -0.4 +0.1 +0.1 +0.8
carbon source L-Ornithine +0.2 +0.0 +0.0 +0.6 -0.5
motility outer cut, LB soft agar motility assay +0.9 +0.2 -0.5 -0.4 +0.5
temperature LB 30C +0.5 +0.2 +0.2 -0.3 +0.2
carbon source acetate (C) -0.2 +0.2 -0.0 +0.6 +0.5
nitrogen source nitrite (N) +0.5 +0.0 +0.3 +0.1 +0.4
pH Minimal media pH9 +0.4 +0.2 +0.1 +0.3 +0.4
anaerobic Anaerobic, acetate donor; nitrate and iron +0.2 +0.5 +0.4 +0.8 -0.1
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