Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15390 and AO353_15395 are separated by 255 nucleotidesAO353_15395 and AO353_15400 are separated by 8 nucleotidesAO353_15400 and AO353_15405 overlap by 4 nucleotidesAO353_15405 and AO353_15410 are separated by 211 nucleotides AO353_15390: AO353_15390 - histidine kinase, at 3,401,000 to 3,402,370 _15390 AO353_15395: AO353_15395 - transcriptional regulator, at 3,402,626 to 3,403,300 _15395 AO353_15400: AO353_15400 - acriflavine resistance protein B, at 3,403,309 to 3,406,404 _15400 AO353_15405: AO353_15405 - RND transporter MFP subunit, at 3,406,401 to 3,407,570 _15405 AO353_15410: AO353_15410 - hypothetical protein, at 3,407,782 to 3,408,027 _15410
Group Condition AO353_15390 AO353_15395 AO353_15400 AO353_15405 AO353_15410
carbon source L-Isoleucine (C) +0.1 -0.8 -0.2 -0.0 -4.0
stress Spectinomycin 0.2 mg/ml +0.2 +0.4 +0.0 -0.0 -3.6
nitrogen source Parabanic Acid (N) +0.1 -0.4 +0.1 -0.6 -1.6
stress Chloramphenicol 0.0025 mg/ml -0.1 -0.4 +0.0 +0.1 -1.9
nitrogen source L-Glutamine (N) -0.3 -0.7 +0.1 +0.1 -1.1
carbon source L-Aspartic Acid (C) +0.0 +0.0 +0.1 -0.4 -1.7
carbon source L-Valine (C) -0.1 +0.1 +0.0 -0.1 -1.7
stress Cisplatin 0.006 mg/ml +0.5 -0.2 +0.4 -0.9 -1.6
nitrogen source L-Serine (N) -0.1 -0.2 +0.1 +0.1 -1.6
stress acetate 17 mM +0.1 -0.2 -0.0 +0.3 -1.7
stress Choline chloride 358 mM +0.1 -0.6 +0.1 +0.1 -1.2
carbon source m-Inositol (C) +0.2 -0.1 -0.1 -0.0 -1.4
carbon source Glycerol (C) +0.3 -0.1 +0.1 -0.0 -1.6
nitrogen source Inosine (N) -0.2 +0.1 +0.0 +0.3 -1.5
motility outer cut, LB soft agar motility assay +0.0 -0.2 +0.2 +0.6 -1.8
carbon source L-Citrulline -0.0 +0.3 -0.1 +0.2 -1.4
stress Paraquat dichloride 0.032 mg/mL +0.3 -0.1 -0.1 +0.2 -1.3
stress Cholin acetate 19 mM +0.2 -0.0 -0.1 +0.3 -1.4
carbon source L-Citrulline -0.0 +1.5 -0.2 +0.2 -2.3
carbon source D-Glucose +0.1 +1.0 -0.2 -0.2 -1.1
pH Minimal media pH9 -0.2 -0.8 +0.1 -0.2 +0.7
stress Benzalkonium Chloride 0.012 mg/ml +0.3 +0.4 +0.1 +0.1 -1.2
carbon source acetate (C) -0.6 -0.5 +0.0 +0.2 +0.7
pH Minimal media pH7 +0.1 -1.0 +0.1 +0.1 +1.3
pH Minimal media pH6 -0.0 -0.5 +0.2 -0.2 +1.1
stress Doxycycline hyclate 0.0006 mg/ml -0.1 -0.1 -0.3 -0.2 +1.3
lb LB +0.1 -0.5 +0.2 -0.2 +1.4
denitrifying Nitrate reduction, replicate B +0.1 +0.5 +0.0 -0.2 +1.2
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 +0.3 -0.1 +0.3 +1.3
motility outer cut, LB soft agar motility assay +0.3 +0.7 +0.3 +0.6 +0.4
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