Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_15035 and AO353_15040 are separated by 22 nucleotidesAO353_15040 and AO353_15045 are separated by 397 nucleotidesAO353_15045 and AO353_15050 are separated by 9 nucleotidesAO353_15050 and AO353_15055 overlap by 13 nucleotides AO353_15035: AO353_15035 - aldehyde dehydrogenase, at 3,326,900 to 3,328,390 _15035 AO353_15040: AO353_15040 - aminotransferase, at 3,328,413 to 3,329,783 _15040 AO353_15045: AO353_15045 - taurine ABC transporter substrate-binding protein, at 3,330,181 to 3,331,167 _15045 AO353_15050: AO353_15050 - nitrate transport permease nrtB, at 3,331,177 to 3,331,980 _15050 AO353_15055: AO353_15055 - sulfonate ABC transporter ATP-binding protein, at 3,331,968 to 3,332,804 _15055
Group Condition AO353_15035 AO353_15040 AO353_15045 AO353_15050 AO353_15055
carbon source L-Isoleucine (C) -0.3 +0.0 +0.0 -1.2 -0.0
nitrogen source L-Arginine (N) +0.3 -0.1 -0.1 -1.2 -0.2
carbon source L-Citrulline -0.6 +0.1 -0.2 -0.5 +0.1
carbon source L-Ornithine -0.7 +0.2 -0.1 -0.8 +0.2
carbon source L-Ornithine -0.6 +0.2 -0.4 -0.1 -0.1
carbon source L-Glutamine (C) -0.1 +0.0 +0.1 -0.9 -0.1
stress Cobalt chloride 0.32 mM -0.5 +0.0 -0.1 -0.4 +0.1
motility outer cut, LB soft agar motility assay -0.9 +0.3 +0.0 +0.0 -0.0
stress Cisplatin 0.006 mg/ml +0.5 -0.1 -0.2 -0.7 -0.2
lb LB +0.3 -0.3 +0.0 -0.6 +0.1
carbon source L-Citrulline -1.0 +0.4 +0.3 -0.1 +0.1
carbon source L-Valine (C) +0.2 +0.2 +0.1 -0.8 -0.0
stress Tetracycline 0.0008 mg/ml +0.2 +0.2 +0.1 -1.0 +0.0
stress Choline chloride 268.5 mM +0.2 +0.1 -0.0 -0.7 +0.0
stress Thallium(I) acetate 0.016 mg/ml +0.4 -0.2 +0.0 -0.8 +0.2
stress Thallium(I) acetate 0.008 mg/ml +0.4 -0.2 +0.1 -0.6 +0.1
carbon source L-Leucine (C) +0.3 -0.3 +0.1 +0.2 -0.5
carbon source L-Aspartic Acid (C) +0.3 -0.2 +0.2 -0.5 +0.0
denitrifying Nitrate reduction, replicate C -0.4 +0.2 +0.0 -0.3 +0.2
stress nitrate 200 mM +0.1 -0.2 -0.3 +0.4 -0.2
carbon source L-Citrulline +0.1 +0.3 +0.4 -0.6 +0.1
carbon source L-Citrulline -0.3 +0.4 -0.3 +0.6 -0.0
carbon source acetate (C) -0.2 -0.2 +0.1 +0.5 +0.3
carbon source L-Ornithine -0.3 +0.0 +0.2 +0.7 -0.2
stress Paraquat dichloride 0.032 mg/mL -0.1 -0.2 -0.1 +0.7 +0.2
stress Sisomicin 0.008 mg/ml +0.2 +0.2 -0.4 +0.6 +0.0
lb LB +0.0 -0.1 +0.2 +0.8 -0.1
stress Spectinomycin 0.15 mg/ml -0.1 +0.2 +0.1 +0.8 +0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.8 -0.0 -0.0 +0.6 +0.0
carbon source D-Glucose +0.2 +0.2 -0.0 +0.9 +0.1
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