Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14985 and AO353_14990 are separated by 225 nucleotidesAO353_14990 and AO353_14995 are separated by 251 nucleotidesAO353_14995 and AO353_15000 are separated by 33 nucleotidesAO353_15000 and AO353_15005 are separated by 287 nucleotides AO353_14985: AO353_14985 - peptidase M48, at 3,312,534 to 3,313,352 _14985 AO353_14990: AO353_14990 - hypothetical protein, at 3,313,578 to 3,314,162 _14990 AO353_14995: AO353_14995 - 16S rRNA methyltransferase, at 3,314,414 to 3,315,412 _14995 AO353_15000: AO353_15000 - glycerate dehydrogenase, at 3,315,446 to 3,316,411 _15000 AO353_15005: AO353_15005 - lysine transporter LysE, at 3,316,699 to 3,317,328 _15005
Group Condition AO353_14985 AO353_14990 AO353_14995 AO353_15000 AO353_15005
carbon source D-Fructose (C) +0.0 -3.9 -0.6 -0.9 -0.2
carbon source L-Phenylalanine (C) +0.1 -3.4 -0.3 -1.1 +0.1
stress Polymyxin B sulfate 4 mg/ml +0.1 -4.1 +0.3 -0.2 -0.4
pH Minimal media pH9 +0.2 -4.2 +0.3 -0.4 -0.2
carbon source Trisodium citrate (C) -0.2 -2.9 -0.5 +0.0 -0.7
carbon source Trisodium citrate (C) -0.3 -3.1 -0.6 +0.2 -0.3
pH Minimal media pH9 -0.2 -4.1 +0.6 -0.4 +0.2
carbon source propionate (C) +0.1 -3.6 +0.3 -0.4 +0.1
motility outer cut, LB soft agar motility assay -0.2 -1.3 -0.3 -0.9 +0.2
stress Cobalt chloride 0.32 mM -0.1 -1.1 -0.5 -0.6 -0.1
stress methylglyoxal 0.009 vol% +0.0 -0.3 -0.8 -0.5 -0.6
stress Fusidic 0.125 mg/ml -0.0 -2.0 +0.2 +0.1 -0.2
stress D-Cycloserine 0.1 mg/ml +0.1 -1.3 -0.5 +0.3 -0.4
carbon source pyruvate (C) +0.1 -1.9 -0.1 +0.2 -0.1
carbon source L-Tryptophan (C) +0.2 -1.8 -0.4 +0.6 -0.2
carbon source Glycerol (C) -0.0 -2.2 -0.0 +0.3 +0.2
carbon source Glycerol (C) +0.1 -1.2 +0.3 -0.3 -0.5
carbon source L-Arginine (C) -0.1 -1.8 -0.0 +0.1 +0.2
carbon source L-Citrulline -0.4 -0.7 +0.4 -0.6 -0.2
anaerobic Anaerobic, acetate donor; nitrate and iron -0.4 +0.1 -0.4 -1.3 +0.5
nitrogen source L-Glutamine (N) +0.2 -1.6 +0.4 +0.4 -0.7
pH Minimal media pH6 -0.1 -1.3 -0.3 +0.5 +0.1
carbon source L-Citrulline -0.1 -2.5 +0.8 +0.9 -0.1
stress copper (II) chloride 2.5 mM -0.1 -1.4 +0.3 +0.2 +0.4
stress Rifampicin 0.005 mg/ml -0.0 -1.9 +0.7 +0.5 +0.3
carbon source L-Valine (C) -0.0 +0.6 -0.5 -0.8 +0.5
stress Sisomicin 0.008 mg/ml +0.3 -0.9 +2.9 -0.7 -0.5
carbon source D-Glucose +0.1 +1.2 -0.6 +0.4 +0.2
motility outer cut, LB soft agar motility assay +0.4 +1.4 +0.2 +0.3 -0.5
stress Doxycycline hyclate 0.0006 mg/ml +0.0 +1.3 +0.5 +0.7 +0.4
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