Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14915 and AO353_14920 overlap by 4 nucleotidesAO353_14920 and AO353_14925 overlap by 4 nucleotidesAO353_14925 and AO353_14930 are separated by 106 nucleotidesAO353_14930 and AO353_14935 are separated by 178 nucleotides AO353_14915: AO353_14915 - (2Fe-2S)-binding protein, at 3,299,415 to 3,299,651 _14915 AO353_14920: AO353_14920 - D-amino acid oxidase, at 3,299,648 to 3,300,763 _14920 AO353_14925: AO353_14925 - hydroxyproline-2-epimerase, at 3,300,760 to 3,301,695 _14925 AO353_14930: AO353_14930 - GntR family transcriptional regulator, at 3,301,802 to 3,302,482 _14930 AO353_14935: AO353_14935 - aminopeptidase, at 3,302,661 to 3,302,948 _14935
Group Condition AO353_14915 AO353_14920 AO353_14925 AO353_14930 AO353_14935
nitrogen source L-Histidine (N) -0.4 -0.1 -0.4 -1.2 -1.3
pH Minimal media pH9 -2.0 -0.4 +0.2 -1.4 +0.4
carbon source D-Lactate (C) -0.7 -0.1 -0.1 -1.5 -0.6
nitrogen source Gly-Glu (N) -0.3 -0.2 +0.1 -1.4 -0.9
carbon source Putrescine (C) -0.5 -0.2 +0.2 -1.3 -0.8
carbon source L-Valine (C) +0.3 +0.4 +0.2 -1.4 -2.1
carbon source L-Citrulline (C) +0.6 -0.2 -0.1 -1.1 -1.7
carbon source D-Alanine (C) -0.7 +0.2 -0.3 -0.4 -1.2
carbon source Carnitine Hydrochloride (C) +0.2 -0.1 -0.5 -0.7 -1.0
nitrogen source Adenine (N) -0.5 +0.3 +0.2 -1.0 -0.8
carbon source L-Aspartic Acid (C) +0.5 +0.1 +0.3 -1.8 -0.7
carbon source D-Ribose (C) +0.2 +0.0 -0.0 -2.1 +0.3
nitrogen source Gly-DL-Asp (N) -0.2 -0.1 +0.5 -1.2 -0.5
carbon source m-Inositol (C) +0.5 +0.3 +0.3 -1.7 -1.0
anaerobic Anaerobic, acetate donor; nitrate and iron +0.3 -0.9 +0.2 -0.1 -1.2
carbon source L-Malic (C) +0.8 +0.0 -0.2 -0.9 -0.9
carbon source D-Trehalose (C) +1.0 -0.2 -0.1 -0.6 -1.2
carbon source L-Histidine (C) +0.6 +0.1 +0.1 -0.5 -1.4
carbon source L-Aspartic Acid (C) +0.4 -0.3 -0.4 -1.4 +0.6
carbon source Tween 20 (C) +0.7 -0.1 -0.1 -0.4 -1.1
stress Cobalt chloride 0.32 mM -0.6 -0.3 -0.3 -0.6 +0.8
stress Cisplatin 0.006 mg/ml -1.3 +0.9 +0.1 +1.2 -1.9
carbon source succinate (C) +0.7 -0.1 -0.3 +0.1 -1.3
nitrogen source L-Serine (N) +0.7 -0.2 +0.1 -1.1 -0.4
stress Cholin acetate 38 mM +0.9 -0.3 -0.4 -0.8 -0.2
carbon source L-Citrulline +1.3 +0.2 -0.6 -1.1 -0.2
carbon source Ethanol (C) +0.9 -0.3 +0.2 -1.1 -0.1
nitrogen source L-Lysine (N) +0.6 -0.1 +0.6 -0.7 -0.7
carbon source L-Ornithine +0.9 -0.2 -0.9 +0.0 +0.5
stress Doxycycline hyclate 0.0006 mg/ml -1.2 -0.1 +0.4 +1.1 +0.3
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