Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14825 and AO353_14830 are separated by 0 nucleotidesAO353_14830 and AO353_14835 are separated by 159 nucleotidesAO353_14835 and AO353_14840 are separated by 196 nucleotidesAO353_14840 and AO353_14845 are separated by 13 nucleotides AO353_14825: AO353_14825 - MerR family transcriptional regulator, at 3,281,607 to 3,282,551 _14825 AO353_14830: AO353_14830 - hypothetical protein, at 3,282,552 to 3,283,514 _14830 AO353_14835: AO353_14835 - FAD-dependent oxidoreductase, at 3,283,674 to 3,284,660 _14835 AO353_14840: AO353_14840 - NAD-dependent dehydratase, at 3,284,857 to 3,285,759 _14840 AO353_14845: AO353_14845 - ferrochelatase, at 3,285,773 to 3,286,795 _14845
Group Condition AO353_14825 AO353_14830 AO353_14835 AO353_14840 AO353_14845
stress methylglyoxal 0.009 vol% -0.1 +0.0 -1.0 -0.0 N.D.
stress acetate 68 mM -0.3 -0.5 -0.1 -0.1 N.D.
stress Cobalt chloride 0.32 mM -0.3 -0.2 -0.4 +0.2 N.D.
carbon source Ethanol (C) +0.2 -0.2 -0.7 +0.1 N.D.
carbon source acetate (C) +0.0 -0.1 -0.5 +0.2 N.D.
carbon source acetate (C) +0.4 -0.2 -0.8 +0.3 N.D.
carbon source Carnitine Hydrochloride (C) +0.3 +0.1 -0.3 -0.3 N.D.
stress methylglyoxal 0.008 vol% +0.1 +0.1 -0.6 +0.2 N.D.
nitrogen source Gly-DL-Asp (N) +0.3 +0.2 -0.4 -0.1 N.D.
carbon source L-Isoleucine (C) +0.2 +0.3 -0.4 -0.0 N.D.
carbon source L-Leucine (C) +0.4 +0.2 -0.4 +0.0 N.D.
denitrifying Nitrate reduction, replicate B +0.3 -0.2 -0.1 +0.4 N.D.
stress Spectinomycin 0.15 mg/ml +0.2 -0.1 -0.1 +0.5 N.D.
stress Doxycycline hyclate 0.0002 mg/ml +0.3 -0.4 +0.1 +0.5 N.D.
stress Spectinomycin 0.2 mg/ml +0.0 -0.3 +0.1 +0.7 N.D.
stress Ceftazidime 0.12 mg/ml +0.2 -0.1 +0.2 +0.5 N.D.
motility outer cut, LB soft agar motility assay +0.4 +0.2 +0.4 -0.2 N.D.
carbon source L-Ornithine +0.3 +0.1 +0.2 +0.3 N.D.
carbon source L-Citrulline +0.3 +0.1 +0.2 +0.4 N.D.
stress Fusidic 0.125 mg/ml -0.0 +0.0 +0.1 +0.9 N.D.
carbon source L-Citrulline +0.6 -0.1 -0.0 +0.6 N.D.
carbon source L-Ornithine +0.4 +0.1 +0.2 +0.3 N.D.
carbon source L-Serine (C) +0.3 -0.0 +0.7 +0.1 N.D.
stress Lomefloxacin 0.001 mM +0.3 -0.0 +0.3 +0.6 N.D.
stress Doxycycline hyclate 0.0006 mg/ml -0.2 +0.3 -0.2 +1.4 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron +0.5 +0.4 +0.2 +0.4 N.D.
carbon source propionate (C) +0.6 +0.3 +0.0 +0.9 N.D.
carbon source propionate (C) +0.6 -0.0 +0.4 +1.0 N.D.
stress Rifampicin 0.005 mg/ml +0.4 +0.1 +0.1 +1.5 N.D.
stress Sisomicin 0.008 mg/ml +0.5 -0.4 +0.7 +1.3 N.D.
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