Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14820 and AO353_14825 are separated by 0 nucleotidesAO353_14825 and AO353_14830 are separated by 0 nucleotidesAO353_14830 and AO353_14835 are separated by 159 nucleotidesAO353_14835 and AO353_14840 are separated by 196 nucleotides AO353_14820: AO353_14820 - deoxyribodipyrimidine photolyase, at 3,280,140 to 3,281,606 _14820 AO353_14825: AO353_14825 - MerR family transcriptional regulator, at 3,281,607 to 3,282,551 _14825 AO353_14830: AO353_14830 - hypothetical protein, at 3,282,552 to 3,283,514 _14830 AO353_14835: AO353_14835 - FAD-dependent oxidoreductase, at 3,283,674 to 3,284,660 _14835 AO353_14840: AO353_14840 - NAD-dependent dehydratase, at 3,284,857 to 3,285,759 _14840
Group Condition AO353_14820 AO353_14825 AO353_14830 AO353_14835 AO353_14840
stress methylglyoxal 0.009 vol% -0.1 -0.1 +0.0 -1.0 -0.0
carbon source Ethanol (C) -0.2 +0.2 -0.2 -0.7 +0.1
stress acetate 68 mM +0.3 -0.3 -0.5 -0.1 -0.1
stress Cobalt chloride 0.32 mM +0.2 -0.3 -0.2 -0.4 +0.2
carbon source Carnitine Hydrochloride (C) -0.1 +0.3 +0.1 -0.3 -0.3
stress Cisplatin 0.006 mg/ml +0.5 -0.3 -0.1 -0.2 -0.1
carbon source acetate (C) +0.2 +0.4 -0.2 -0.8 +0.3
carbon source D-Trehalose (C) +0.2 +0.3 -0.0 -0.5 -0.0
nitrogen source Gly-DL-Asp (N) -0.1 +0.3 +0.2 -0.4 -0.1
stress methylglyoxal 0.008 vol% +0.1 +0.1 +0.1 -0.6 +0.2
carbon source L-Leucine (C) -0.2 +0.4 +0.2 -0.4 +0.0
denitrifying Nitrate reduction, replicate B -0.3 +0.3 -0.2 -0.1 +0.4
carbon source L-Ornithine -0.2 +0.4 +0.2 -0.1 +0.2
stress Doxycycline hyclate 0.0002 mg/ml -0.0 +0.3 -0.4 +0.1 +0.5
stress Spectinomycin 0.15 mg/ml +0.0 +0.2 -0.1 -0.1 +0.5
motility outer cut, LB soft agar motility assay -0.1 +0.4 +0.2 +0.4 -0.2
pH Minimal media pH9 +0.5 +0.0 +0.1 -0.2 +0.4
carbon source L-Citrulline -0.1 +0.3 +0.1 +0.2 +0.4
stress Spectinomycin 0.2 mg/ml +0.3 +0.0 -0.3 +0.1 +0.7
stress Fusidic 0.125 mg/ml +0.1 -0.0 +0.0 +0.1 +0.9
carbon source L-Serine (C) -0.0 +0.3 -0.0 +0.7 +0.1
carbon source L-Ornithine +0.1 +0.4 +0.1 +0.2 +0.3
carbon source L-Citrulline +0.2 +0.6 -0.1 -0.0 +0.6
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.5 +0.4 +0.2 +0.4
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.2 +0.3 -0.2 +1.4
stress Lomefloxacin 0.001 mM +0.3 +0.3 -0.0 +0.3 +0.6
carbon source propionate (C) -0.2 +0.6 +0.3 +0.0 +0.9
stress Sisomicin 0.008 mg/ml -0.2 +0.5 -0.4 +0.7 +1.3
carbon source propionate (C) +0.1 +0.6 -0.0 +0.4 +1.0
stress Rifampicin 0.005 mg/ml +0.2 +0.4 +0.1 +0.1 +1.5
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