Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14440 and AO353_14445 overlap by 4 nucleotidesAO353_14445 and AO353_14450 overlap by 1 nucleotidesAO353_14450 and AO353_14455 are separated by 9 nucleotidesAO353_14455 and AO353_14460 are separated by 255 nucleotides AO353_14440: AO353_14440 - ABC transporter substrate-binding protein, at 3,202,108 to 3,202,995 _14440 AO353_14445: AO353_14445 - ABC transporter permease, at 3,202,992 to 3,204,029 _14445 AO353_14450: AO353_14450 - hemin ABC transporter ATP-binding protein, at 3,204,029 to 3,204,796 _14450 AO353_14455: AO353_14455 - iron(III) ABC transporter, at 3,204,806 to 3,205,657 _14455 AO353_14460: AO353_14460 - competence protein TfoX, at 3,205,913 to 3,206,185 _14460
Group Condition AO353_14440 AO353_14445 AO353_14450 AO353_14455 AO353_14460
stress Lomefloxacin 0.001 mM -1.1 -0.4 +0.2 -0.4 +0.0
carbon source D-Ribose (C) -0.5 -0.3 -0.1 -0.1 -0.7
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.7 -0.2 -0.1 +0.1 -0.6
stress Doxycycline hyclate 0.0002 mg/ml -0.2 -0.3 -0.5 -0.4 +0.2
carbon source D-Ribose (C) -0.3 +0.1 -0.2 -0.1 -0.5
stress Chloride 500 mM -0.4 +0.2 -0.2 -0.3 -0.3
stress perchlorate 75 mM -0.5 -0.2 +0.3 -0.2 -0.2
carbon source L-Leucine (C) -0.9 +0.4 +0.1 -0.3 -0.2
stress 1-ethyl-3-methylimidazolium lysine 10.5 mM +0.4 -0.0 -0.6 -0.2 -0.3
stress Doxycycline hyclate 0.0006 mg/ml -1.1 -0.0 -0.2 +0.1 +0.5
stress Benzalkonium Chloride 0.012 mg/ml -0.2 +0.6 -0.4 -0.1 -0.4
anaerobic Anaerobic, acetate donor; nitrate and iron +0.1 +0.3 -0.2 +0.4 -0.6
pH Minimal media pH9 -0.5 +0.3 +0.5 -0.1 +0.0
denitrifying Nitrate reduction, replicate C -0.2 +0.5 +0.3 +0.2 -0.5
carbon source acetate (C) -0.7 +0.2 +1.0 -0.0 -0.2
carbon source L-Ornithine -0.9 +0.0 -0.1 +0.1 +1.3
carbon source acetate (C) -0.2 -0.3 +1.0 -0.0 -0.1
carbon source L-Ornithine -0.6 +0.1 -0.3 +0.1 +1.2
carbon source L-Ornithine -0.9 -0.1 +0.7 +0.2 +1.3
motility outer cut, LB soft agar motility assay +0.5 +0.0 +1.2 -0.4 +0.2
carbon source D-Glucose -0.1 -0.0 +0.2 +0.2 +1.2
carbon source L-Serine (C) +1.0 -0.0 +0.8 +0.3 -0.4
carbon source L-Citrulline -0.2 -0.4 +0.3 +0.5 +1.4
carbon source L-Ornithine -0.5 -0.0 +0.4 +0.4 +1.4
carbon source L-Citrulline +0.5 +0.3 -0.5 +0.3 +1.3
survival 4C survival; 672 hrs +0.4 +0.2 +0.7 +0.5 +0.4
stress Sisomicin 0.008 mg/ml +1.5 +0.3 +0.2 +0.7 -0.5
carbon source L-Citrulline +0.5 +0.3 +0.0 +0.4 +1.1
carbon source D-Glucose +0.3 -0.2 +0.8 +0.2 +1.3
carbon source L-Citrulline +0.1 +0.2 +0.5 +0.5 +1.2
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