Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_14395 and AO353_14400 are separated by 712 nucleotidesAO353_14400 and AO353_14405 are separated by 22 nucleotidesAO353_14405 and AO353_14410 overlap by 11 nucleotidesAO353_14410 and AO353_14415 are separated by 77 nucleotides AO353_14395: AO353_14395 - poly(A) polymerase, at 3,191,183 to 3,192,586 _14395 AO353_14400: AO353_14400 - Fis family transcriptional regulator, at 3,193,299 to 3,194,732 _14400 AO353_14405: AO353_14405 - ATPase, at 3,194,755 to 3,197,703 _14405 AO353_14410: AO353_14410 - MFS transporter, at 3,197,693 to 3,197,869 _14410 AO353_14415: AO353_14415 - glutamyl-Q tRNA(Asp) ligase, at 3,197,947 to 3,198,843 _14415
Group Condition AO353_14395 AO353_14400 AO353_14405 AO353_14410 AO353_14415
carbon source Trisodium citrate (C) -0.9 -4.0 -2.0 -1.8 -0.2
carbon source Trisodium citrate (C) -0.9 -4.1 -2.2 -1.5 -0.0
carbon source L-Histidine (C) -0.2 -3.6 -2.3 -1.9 -0.1
carbon source L-Histidine (C) -0.4 -3.3 -1.9 -1.6 -0.3
carbon source a-Ketoglutaric (C) -0.7 -4.2 -1.5 -0.8 -0.2
carbon source D-Lactate (C) -1.9 -3.9 -1.3 -0.3 +0.1
carbon source m-Inositol (C) -0.9 -3.0 -1.8 -1.0 -0.7
carbon source D-Trehalose (C) -1.4 -3.0 -1.6 -1.0 -0.1
carbon source Carnitine Hydrochloride (C) -1.0 -3.4 -1.8 -0.6 -0.3
carbon source D-Lactate (C) -1.3 -4.5 -1.1 -0.2 +0.0
pH Minimal media pH9 -0.1 -3.9 -1.1 -0.1 -1.7
carbon source D,L-Lactate (C) -1.2 -3.6 -1.5 -0.6 -0.1
carbon source D-Trehalose (C) -1.5 -3.1 -1.7 -0.7 -0.0
carbon source a-Ketoglutaric (C) -0.8 -3.8 -1.6 -0.5 -0.2
pH Minimal media pH6 -1.3 -3.9 -1.1 -0.0 -0.3
carbon source D-Gluconic Acid (C) -1.0 -3.9 -1.0 -0.4 -0.2
carbon source m-Inositol (C) -0.5 -3.2 -1.8 -0.8 -0.3
carbon source D,L-Lactate (C) -1.1 -3.8 -1.4 -0.3 +0.0
carbon source L-Arginine (C) -1.1 -3.3 -1.4 -0.3 -0.5
survival 4C survival; 672 hrs -1.3 -2.3 -1.3 -1.3 -0.5
carbon source L-Phenylalanine (C) -1.3 -2.9 -1.4 -0.1 -0.5
carbon source L-Proline (C) +0.0 -2.6 -1.9 -1.6 -0.3
carbon source L-Lactate (C) -0.9 -3.7 -1.2 -0.4 +0.1
carbon source L-Asparagine (C) -0.2 -3.3 -1.6 -0.7 -0.3
carbon source D-Gluconic Acid (C) -0.6 -3.8 -1.3 -0.2 -0.1
pH Minimal media pH9 +0.3 -2.3 -1.6 -0.8 -1.5
carbon source Putrescine (C) -0.2 -3.4 -1.5 -0.7 -0.0
carbon source L-Citrulline (C) -2.8 -2.5 -0.8 +0.0 +0.2
pH Minimal media pH8 -0.8 -3.9 -0.9 -0.2 +0.0
stress Sisomicin 0.008 mg/ml +0.9 +2.0 +1.5 +0.9 -1.0
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