Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13950 and AO353_13955 are separated by 203 nucleotidesAO353_13955 and AO353_13960 are separated by 343 nucleotidesAO353_13960 and AO353_13965 are separated by 45 nucleotidesAO353_13965 and AO353_13970 are separated by 284 nucleotides AO353_13950: AO353_13950 - 50S rRNA methyltransferase, at 3,098,725 to 3,099,849 _13950 AO353_13955: AO353_13955 - hypothetical protein, at 3,100,053 to 3,100,769 _13955 AO353_13960: AO353_13960 - ferredoxin-NADP reductase, at 3,101,113 to 3,101,889 _13960 AO353_13965: AO353_13965 - large-conductance mechanosensitive channel, at 3,101,935 to 3,102,348 _13965 AO353_13970: AO353_13970 - catalase, at 3,102,633 to 3,104,174 _13970
Group Condition AO353_13950 AO353_13955 AO353_13960 AO353_13965 AO353_13970
stress Thallium(I) acetate 0.008 mg/ml -0.4 -0.0 -2.5 +0.1 -0.1
stress Paraquat dichloride 0.032 mg/mL +0.3 -0.1 -3.6 +0.3 +0.2
stress Thallium(I) acetate 0.008 mg/ml +0.1 +0.1 -2.3 -0.1 -0.3
stress Thallium(I) acetate 0.016 mg/ml +0.5 +0.1 -2.4 -0.1 -0.1
stress Thallium(I) acetate 0.016 mg/ml -0.1 +0.2 -2.4 +0.4 -0.0
lb LB -0.1 +0.1 -0.0 -1.0 -0.1
anaerobic N1B4wt with N2E3m denitrifying replicate C -0.8 +0.2 -0.2 +0.5 -0.1
stress Doxycycline hyclate 0.0006 mg/ml +0.4 -0.2 +0.0 -0.8 +0.1
carbon source propionate (C) -0.8 +0.1 +0.2 +0.5 +0.1
motility outer cut, LB soft agar motility assay -0.2 +0.5 -0.0 -0.4 +0.3
stress Cholin acetate 38 mM -0.5 +0.1 +0.1 +0.6 -0.0
stress acetate 68 mM -0.5 +0.1 -0.1 +0.6 +0.1
carbon source butyrate (C) -0.4 +0.3 +0.1 +0.4 +0.0
motility outer cut, LB soft agar motility assay +0.7 +0.3 +0.1 -0.8 +0.2
carbon source L-Alanine (C) -0.5 +0.4 +0.2 +0.6 +0.0
pH Minimal media pH9 +0.3 -0.3 +0.1 +0.3 +0.3
carbon source L-Valine (C) +0.3 +0.3 +0.3 +0.2 -0.2
carbon source L-Arginine (C) -0.2 +0.2 +0.2 +0.6 +0.1
stress nitrate 200 mM +0.1 +0.3 +0.2 +0.5 -0.1
stress A22 0.002 mg/ml +0.5 +0.1 -0.0 +0.5 +0.1
carbon source L-Citrulline +0.5 +0.2 -0.2 +0.7 -0.1
carbon source L-Ornithine -0.0 +0.3 +0.3 +0.4 +0.2
carbon source Trisodium citrate (C) +0.5 +0.2 -0.1 +0.4 +0.2
nitrogen source L-Glutamic (N) +0.4 +0.3 -0.0 +0.5 +0.1
carbon source pyruvate (C) +0.3 +0.2 +0.0 +0.5 +0.2
carbon source a-Ketoglutaric (C) +0.5 +0.3 +0.0 +0.4 +0.1
nitrogen source Glycine (N) +0.5 +0.3 +0.1 +0.3 +0.2
carbon source D-Trehalose (C) +0.3 +0.1 -0.0 +0.8 +0.2
carbon source L-Citrulline +0.4 -0.3 +0.1 +1.1 +0.4
carbon source L-Citrulline +0.9 +0.1 +0.3 +0.7 -0.2
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