Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13895 and AO353_13900 are separated by 368 nucleotidesAO353_13900 and AO353_13905 are separated by 55 nucleotidesAO353_13905 and AO353_13910 overlap by 4 nucleotidesAO353_13910 and AO353_13915 are separated by 215 nucleotides AO353_13895: AO353_13895 - chemotaxis protein, at 3,086,694 to 3,088,640 _13895 AO353_13900: AO353_13900 - kinase, at 3,089,009 to 3,089,902 _13900 AO353_13905: AO353_13905 - tRNA (uracil-5-)-methyltransferase, at 3,089,958 to 3,091,037 _13905 AO353_13910: AO353_13910 - guanine permease, at 3,091,034 to 3,092,329 _13910 AO353_13915: AO353_13915 - hypothetical protein, at 3,092,545 to 3,093,003 _13915
Group Condition AO353_13895 AO353_13900 AO353_13905 AO353_13910 AO353_13915
stress Cobalt chloride 0.32 mM +0.0 +0.0 -1.7 -0.8 -0.0
stress Cobalt chloride 0.32 mM -0.1 -0.1 -1.8 -0.4 -0.0
carbon source L-Citrulline +0.0 +0.0 -0.5 -0.6 -0.5
pH Minimal media pH9 +0.2 +0.2 -1.1 -0.7 +0.1
motility outer cut, LB soft agar motility assay +0.2 -0.0 -0.9 -0.4 -0.1
stress methylglyoxal 0.009 vol% +0.0 -0.3 -0.8 -0.2 -0.1
stress Benzalkonium Chloride 0.012 mg/ml -0.0 +0.1 -0.5 -0.4 -0.3
carbon source L-Leucine (C) +0.1 +0.1 -0.4 -0.9 -0.1
carbon source L-Ornithine -0.2 +0.4 -0.7 -0.6 -0.0
carbon source D-Glucose +0.1 +0.3 -0.7 -0.3 -0.5
survival 4C survival; 672 hrs -0.1 +0.1 -0.5 -0.8 +0.2
stress Cobalt chloride 0.16 mM -0.2 -0.2 -0.6 -0.4 +0.4
carbon source acetate (C) +0.3 -0.2 -0.4 -0.1 -0.6
stress Sisomicin 0.008 mg/ml +0.2 +0.1 -0.3 -1.0 +0.1
carbon source L-Valine (C) -0.2 +0.2 -0.3 -0.6 +0.1
carbon source L-Citrulline +0.1 -0.2 -0.9 +0.3 -0.0
carbon source L-Ornithine -0.1 +0.5 -0.2 -0.3 -0.3
pH Minimal media pH9 -0.0 +0.2 -0.7 -0.5 +0.6
motility outer cut, LB soft agar motility assay +0.3 -0.3 -0.8 -0.2 +0.5
carbon source acetate (C) +0.1 +0.0 -0.4 -0.4 +0.3
carbon source L-Citrulline +0.2 +0.0 -0.6 -0.2 +0.2
stress Cisplatin 0.006 mg/ml -0.2 -0.0 -0.4 +0.3 +0.3
stress Cisplatin 0.006 mg/ml +0.2 +0.4 -0.9 +0.6 -0.3
carbon source L-Ornithine -0.2 +0.7 -0.5 -0.0 +0.1
denitrifying Nitrate reduction, replicate B -0.1 +0.4 +0.4 -0.0 -0.5
stress Rifampicin 0.005 mg/ml +0.1 -0.5 +0.4 +0.4 -0.1
stress perchlorate 75 mM -0.4 +0.6 -0.1 +0.2 +0.3
stress Doxycycline hyclate 0.0002 mg/ml +0.3 -0.2 +0.3 +0.6 +0.1
stress Lomefloxacin 0.001 mM +0.3 -0.4 +0.3 +1.0 +0.1
stress nitrate 200 mM -0.3 +0.8 -0.1 +0.5 +0.6
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