Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13775 and AO353_13780 are separated by 75 nucleotidesAO353_13780 and AO353_13785 are separated by 125 nucleotidesAO353_13785 and AO353_13790 are separated by 526 nucleotidesAO353_13790 and AO353_13795 are separated by 119 nucleotides AO353_13775: AO353_13775 - pilus assembly protein TadE, at 3,062,042 to 3,062,488 _13775 AO353_13780: AO353_13780 - peptidase A24, at 3,062,564 to 3,063,034 _13780 AO353_13785: AO353_13785 - LuxR family transcriptional regulator, at 3,063,160 to 3,063,927 _13785 AO353_13790: AO353_13790 - hypothetical protein, at 3,064,454 to 3,064,843 _13790 AO353_13795: AO353_13795 - hypothetical protein, at 3,064,963 to 3,065,715 _13795
Group Condition AO353_13775 AO353_13780 AO353_13785 AO353_13790 AO353_13795
nitrogen source Uridine (N) -0.2 -0.5 -0.2 -0.2 -0.1
carbon source D-Fructose (C) -0.4 -0.1 -0.1 -0.3 +0.1
carbon source L-Ornithine -0.9 -0.1 -0.0 +0.1 +0.0
carbon source D-Alanine (C) -0.4 +0.1 -0.1 +0.2 -0.4
stress copper (II) chloride 2.5 mM -0.4 -0.2 +0.3 -0.2 -0.0
carbon source D-Glucose -0.2 +0.3 -0.4 -0.2 +0.0
carbon source L-Ornithine -0.1 +0.5 -0.3 +0.0 -0.6
carbon source L-Serine (C) -0.2 -0.2 +0.3 -0.2 -0.2
nitrogen source Parabanic Acid (N) +0.2 +0.1 +0.1 -0.3 -0.5
nitrogen source Putrescine (N) -0.2 -0.3 +0.2 -0.2 +0.2
nitrogen source L-Phenylalanine (N) +0.2 -0.5 +0.2 -0.2 -0.2
motility outer cut, LB soft agar motility assay +0.3 -0.4 -0.4 +0.2 -0.0
pH Minimal media pH9 -0.4 -0.3 +0.3 -0.2 +0.2
stress Cisplatin 0.006 mg/ml -0.8 +0.4 +0.4 -0.5 +0.2
carbon source D-Glucose -0.4 -0.1 +0.1 -0.2 +0.3
motility outer cut, LB soft agar motility assay +0.3 -0.2 +0.0 -0.5 +0.2
carbon source L-Citrulline -0.5 +0.4 -0.1 +0.2 +0.1
stress Doxycycline hyclate 0.0006 mg/ml -0.5 +0.4 +0.5 -0.0 -0.3
carbon source L-Citrulline +0.1 -0.4 +0.3 +0.5 -0.2
carbon source L-Citrulline -0.2 -0.1 +0.2 -0.2 +0.5
stress Cisplatin 0.006 mg/ml -0.1 +0.3 +0.3 -0.3 +0.0
carbon source L-Phenylalanine (C) +0.3 +0.1 -0.5 +0.3 +0.0
stress acetate 68 mM +0.1 +0.4 +0.1 -0.3 -0.1
carbon source L-Leucine (C) +0.4 +0.2 -0.3 -0.2 +0.1
stress Choline Lysine 12 mM +0.1 +0.4 +0.2 -0.3 +0.1
stress Sisomicin 0.008 mg/ml +0.0 -0.2 -0.1 +0.4 +0.5
anaerobic Anaerobic, acetate donor; nitrate and iron -0.2 +0.9 +0.4 -0.2 -0.1
motility outer cut, LB soft agar motility assay +0.5 -0.0 +0.1 +0.5 -0.1
carbon source L-Valine (C) +0.4 +0.3 -0.1 +0.4 -0.0
carbon source acetate (C) +0.0 +0.2 +0.2 +0.4 +0.2
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