Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13720 and AO353_13725 are separated by 233 nucleotidesAO353_13725 and AO353_13730 overlap by 4 nucleotidesAO353_13730 and AO353_13735 are separated by 226 nucleotidesAO353_13735 and AO353_13740 are separated by 293 nucleotides AO353_13720: AO353_13720 - arginine decarboxylase, at 3,048,207 to 3,050,120 _13720 AO353_13725: AO353_13725 - type VI secretion protein, at 3,050,354 to 3,051,736 _13725 AO353_13730: AO353_13730 - hypothetical protein, at 3,051,733 to 3,052,518 _13730 AO353_13735: AO353_13735 - MATE family efflux transporter, at 3,052,745 to 3,054,085 _13735 AO353_13740: AO353_13740 - MFS transporter, at 3,054,379 to 3,054,672 _13740
Group Condition AO353_13720 AO353_13725 AO353_13730 AO353_13735 AO353_13740
stress methylglyoxal 0.009 vol% -2.3 +0.1 +0.0 -0.1 -0.1
stress Benzalkonium Chloride 0.01 mg/ml -1.0 -0.4 -0.3 -0.2 -0.7
stress Tetracycline 0.0016 mg/ml -1.5 -0.4 -0.1 -0.3 -0.2
stress Lomefloxacin 0.001 mM -1.1 -0.3 -0.7 -0.4 +0.4
carbon source L-Arginine (C) -2.0 -0.2 +0.0 +0.1 -0.1
carbon source L-Arginine (C) -2.2 +0.0 -0.1 +0.1 +0.1
stress Spectinomycin 0.2 mg/ml -1.9 -0.3 +0.1 -0.0 +0.1
stress Rifampicin 0.005 mg/ml -1.2 -0.2 +0.1 +0.1 -0.4
carbon source acetate (C) -1.5 -0.2 +0.1 -0.1 +0.0
nitrogen source L-Arginine (N) -1.1 +0.1 +0.3 -0.1 -0.7
stress Cobalt chloride 0.32 mM -1.5 -0.2 +0.2 +0.1 -0.2
stress Doxycycline hyclate 0.0002 mg/ml -1.2 +0.2 -0.0 -0.0 -0.5
stress Spectinomycin 0.15 mg/ml -1.5 -0.4 +0.1 +0.1 +0.4
stress sodium fluoride 6.25 mM -1.1 -0.4 -0.0 +0.1 +0.3
stress Cobalt chloride 0.32 mM -1.4 +0.1 -0.1 +0.2 -0.1
stress Doxycycline hyclate 0.0006 mg/ml -1.9 +0.3 +0.1 +0.1 +0.4
stress Cisplatin 0.006 mg/ml -1.3 +0.2 +0.8 -0.3 +0.2
carbon source L-Leucine (C) -0.4 -0.6 -0.1 +0.0 +0.7
carbon source acetate (C) -2.0 +0.3 -0.1 +0.6 +0.9
carbon source L-Citrulline -0.1 -0.7 +0.1 +0.3 +0.5
carbon source L-Citrulline -0.2 -0.2 +0.2 +0.2 +0.8
motility outer cut, LB soft agar motility assay +1.0 -0.4 +0.1 -0.3 +0.5
stress Cisplatin 0.006 mg/ml -0.8 +0.4 +0.3 +0.3 +0.8
carbon source L-Ornithine +2.1 +0.1 +0.0 +0.1 -1.0
stress Nickel (II) chloride 0.625 mM +0.1 -0.4 +0.0 -0.4 +2.0
motility outer cut, LB soft agar motility assay +1.2 -0.1 +0.1 -0.3 +0.6
carbon source L-Ornithine +2.3 -0.0 -0.0 +0.3 -0.2
pH Minimal media pH9 +0.9 +0.1 +0.3 +0.3 +0.7
carbon source L-Ornithine +3.4 +0.2 +0.3 -0.2 -0.2
carbon source L-Ornithine +4.7 +0.2 -0.2 +0.3 -0.6
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