Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N2E3
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 216 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
AO353_13710 and AO353_13715 are separated by 262 nucleotides
AO353_13715 and AO353_13720 are separated by 218 nucleotides
AO353_13720 and AO353_13725 are separated by 233 nucleotides
AO353_13725 and AO353_13730 overlap by 4 nucleotides
AO353_13710: AO353_13710 - NUDIX hydrolase, at 3,046,785 to 3,047,354
_13710
AO353_13715: AO353_13715 - translation initiation factor Sui1, at 3,047,617 to 3,047,988
_13715
AO353_13720: AO353_13720 - arginine decarboxylase, at 3,048,207 to 3,050,120
_13720
AO353_13725: AO353_13725 - type VI secretion protein, at 3,050,354 to 3,051,736
_13725
AO353_13730: AO353_13730 - hypothetical protein, at 3,051,733 to 3,052,518
_13730
Group
Condition
AO353
_13710
AO353
_13715
AO353
_13720
AO353
_13725
AO353
_13730
stress
methylglyoxal 0.009 vol%
-0.3
+0.1
-2.3
+0.1
+0.0
carbon source
L-Arginine (C)
+0.2
-0.1
-2.2
+0.0
-0.1
stress
Cobalt chloride 0.32 mM
-0.0
-0.9
-1.4
+0.1
-0.1
carbon source
m-Inositol (C)
-0.1
-1.8
-0.1
-0.1
+0.0
carbon source
acetate (C)
+0.6
-0.9
-2.0
+0.3
-0.1
stress
Benzalkonium Chloride 0.01 mg/ml
+0.1
-0.4
-1.0
-0.4
-0.3
stress
Chloramphenicol 0.004 mg/ml
+0.1
-1.2
-0.7
-0.1
+0.0
stress
Cobalt chloride 0.32 mM
+0.3
-0.6
-1.5
-0.2
+0.2
carbon source
L-Arginine (C)
+0.2
+0.3
-2.0
-0.2
+0.0
stress
Spectinomycin 0.15 mg/ml
-0.1
+0.4
-1.5
-0.4
+0.1
temperature
LB 30C
+0.1
-1.6
-0.1
+0.1
-0.1
nitrogen source
L-Arginine (N)
-0.1
-0.6
-1.1
+0.1
+0.3
carbon source
acetate (C)
+0.2
+0.1
-1.5
-0.2
+0.1
stress
Doxycycline hyclate 0.0006 mg/ml
+0.1
+0.2
-1.9
+0.3
+0.1
stress
Spectinomycin 0.2 mg/ml
+0.1
+1.0
-1.9
-0.3
+0.1
anaerobic
Anaerobic, acetate donor; nitrate and iron
-0.3
-1.1
-0.0
+0.4
+0.2
stress
Cisplatin 0.006 mg/ml
-0.2
-0.1
-1.3
+0.2
+0.8
stress
Rifampicin 0.005 mg/ml
+0.2
+0.4
-1.2
-0.2
+0.1
stress
Cisplatin 0.006 mg/ml
+0.1
-0.6
-0.8
+0.4
+0.3
stress
Sisomicin 0.008 mg/ml
-0.1
+1.2
-1.1
-0.4
-0.1
stress
Tetracycline 0.0016 mg/ml
-0.1
+1.5
-1.5
-0.4
-0.1
stress
Lomefloxacin 0.001 mM
+0.1
+1.7
-1.1
-0.3
-0.7
stress
Doxycycline hyclate 0.0002 mg/ml
+0.0
+0.7
-1.2
+0.2
-0.0
carbon source
L-Ornithine
-0.4
-0.7
+2.3
-0.0
-0.0
motility
outer cut, LB soft agar motility assay
+0.1
+0.7
+1.0
-0.4
+0.1
motility
outer cut, LB soft agar motility assay
-0.4
+1.2
+0.9
-0.3
+0.0
carbon source
L-Ornithine
-0.1
-0.4
+2.1
+0.1
+0.0
motility
outer cut, LB soft agar motility assay
+0.2
+1.0
+1.2
-0.1
+0.1
carbon source
L-Ornithine
-0.6
-0.5
+4.7
+0.2
-0.2
carbon source
L-Ornithine
-0.2
+0.1
+3.4
+0.2
+0.3
remove
AO353_13710
plot
remove
AO353_13715
plot
remove
AO353_13720
remove
AO353_13725
plot
remove
AO353_13730
plot