Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13535 and AO353_13540 overlap by 1 nucleotidesAO353_13540 and AO353_13545 are separated by 132 nucleotidesAO353_13545 and AO353_13550 are separated by 364 nucleotidesAO353_13550 and AO353_13555 overlap by 4 nucleotides AO353_13535: AO353_13535 - urea ABC transporter permease subunit UrtC, at 3,004,157 to 3,005,236 _13535 AO353_13540: AO353_13540 - urea ABC transporter permease, at 3,005,236 to 3,006,735 _13540 AO353_13545: AO353_13545 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,006,868 to 3,008,133 _13545 AO353_13550: AO353_13550 - ABC transporter permease, at 3,008,498 to 3,009,508 _13550 AO353_13555: AO353_13555 - iron ABC transporter substrate-binding protein, at 3,009,505 to 3,010,464 _13555
Group Condition AO353_13535 AO353_13540 AO353_13545 AO353_13550 AO353_13555
nitrogen source Parabanic Acid (N) -1.2 -1.9 -1.7 N.D. -0.5
motility outer cut, LB soft agar motility assay -0.1 -0.4 -0.7 N.D. -1.1
nitrogen source Inosine (N) -0.7 -0.6 -0.7 N.D. +0.1
nitrogen source Adenine (N) -0.5 -0.5 -0.3 N.D. +0.1
carbon source L-Alanine (C) -0.2 -0.0 -0.2 N.D. -0.3
motility outer cut, LB soft agar motility assay -0.1 -0.1 +0.2 N.D. -0.8
stress Doxycycline hyclate 0.0006 mg/ml +0.1 -0.0 -0.5 N.D. -0.3
stress sodium fluoride 6.25 mM -0.3 +0.1 -0.0 N.D. -0.5
denitrifying Nitrate reduction, replicate B -0.0 -0.5 -0.3 N.D. +0.3
carbon source Fumarate (C) -0.1 +0.2 -0.2 N.D. -0.3
stress Furfuryl Alcohol 0.125 vol% -0.3 -0.0 +0.3 N.D. -0.4
stress acetate 68 mM +0.2 -0.2 +0.0 N.D. -0.4
carbon source L-Valine (C) -0.3 +0.3 -0.0 N.D. -0.3
stress 1-ethyl-3-methylimidazolium acetate 30 mM -0.2 +0.3 +0.1 N.D. -0.6
pH Minimal media pH9 -0.3 -0.2 -0.1 N.D. +0.3
stress copper (II) chloride 2.5 mM +0.1 +0.1 +0.1 N.D. -0.6
carbon source L-Citrulline -0.4 +0.0 +0.3 N.D. +0.0
stress Thallium(I) acetate 0.008 mg/ml -0.3 -0.3 +0.0 N.D. +0.4
stress Cholin acetate 10 mM +0.1 -0.0 +0.3 N.D. -0.4
stress Paraquat dichloride 0.032 mg/mL -0.6 +0.4 +0.1 N.D. +0.2
carbon source acetate (C) -0.4 +0.1 -0.1 N.D. +0.6
lb LB +0.3 +0.2 +0.1 N.D. -0.3
carbon source L-Ornithine +0.1 +0.0 +0.5 N.D. -0.3
stress Thallium(I) acetate 0.008 mg/ml -0.3 -0.0 +0.2 N.D. +0.3
lb LB -0.3 +0.2 +0.2 N.D. +0.3
carbon source D-Trehalose (C) +0.3 +0.1 +0.3 N.D. -0.2
carbon source L-Ornithine +0.2 -0.1 +0.0 N.D. +0.5
stress Sisomicin 0.008 mg/ml +0.1 -0.1 +0.2 N.D. +0.6
stress Cisplatin 0.006 mg/ml +0.4 +0.1 +0.0 N.D. +0.3
motility outer cut, LB soft agar motility assay +0.0 +0.1 +0.2 N.D. +1.3
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