Fitness for 5 genes in Pseudomonas fluorescens FW300-N2E3

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500 ntAO353_13530 and AO353_13535 overlap by 4 nucleotidesAO353_13535 and AO353_13540 overlap by 1 nucleotidesAO353_13540 and AO353_13545 are separated by 132 nucleotidesAO353_13545 and AO353_13550 are separated by 364 nucleotides AO353_13530: AO353_13530 - ABC transporter ATP-binding protein, at 3,003,291 to 3,004,160 _13530 AO353_13535: AO353_13535 - urea ABC transporter permease subunit UrtC, at 3,004,157 to 3,005,236 _13535 AO353_13540: AO353_13540 - urea ABC transporter permease, at 3,005,236 to 3,006,735 _13540 AO353_13545: AO353_13545 - branched-chain amino acid ABC transporter substrate-binding protein, at 3,006,868 to 3,008,133 _13545 AO353_13550: AO353_13550 - ABC transporter permease, at 3,008,498 to 3,009,508 _13550
Group Condition AO353_13530 AO353_13535 AO353_13540 AO353_13545 AO353_13550
nitrogen source Parabanic Acid (N) -4.1 -1.2 -1.9 -1.7 N.D.
nitrogen source Inosine (N) -0.1 -0.7 -0.6 -0.7 N.D.
pH Minimal media pH9 -0.9 -0.3 -0.2 -0.1 N.D.
nitrogen source Adenine (N) -0.2 -0.5 -0.5 -0.3 N.D.
carbon source acetate (C) -1.0 -0.4 +0.1 -0.1 N.D.
denitrifying Nitrate reduction, replicate B -0.5 -0.0 -0.5 -0.3 N.D.
nitrogen source Glycine (N) -1.1 +0.0 -0.1 -0.0 N.D.
carbon source L-Alanine (C) -0.7 -0.2 -0.0 -0.2 N.D.
nitrogen source Glycine (N) -0.8 -0.2 -0.1 +0.1 N.D.
motility outer cut, LB soft agar motility assay +0.7 -0.1 -0.4 -0.7 N.D.
stress Cisplatin 0.006 mg/ml -0.7 +0.0 +0.3 +0.1 N.D.
carbon source Ethanol (C) -0.5 +0.2 -0.1 +0.3 N.D.
survival 4C survival; 672 hrs -0.4 +0.4 -0.0 +0.1 N.D.
stress Paraquat dichloride 0.032 mg/mL +0.2 -0.6 +0.4 +0.1 N.D.
stress Spectinomycin 0.2 mg/ml +0.7 +0.0 -0.2 -0.1 N.D.
carbon source D-Glucose +0.5 -0.3 +0.1 +0.1 N.D.
anaerobic Anaerobic, acetate donor; nitrate and iron +0.5 +0.2 -0.2 -0.1 N.D.
carbon source L-Citrulline +0.9 -0.4 +0.0 +0.0 N.D.
carbon source L-Citrulline +0.7 -0.4 +0.0 +0.3 N.D.
carbon source L-Leucine (C) +0.8 -0.0 -0.0 -0.1 N.D.
carbon source D-Alanine (C) +0.6 -0.0 +0.2 -0.1 N.D.
stress Lomefloxacin 0.001 mM +0.6 +0.2 -0.2 +0.0 N.D.
carbon source L-Tryptophan (C) +1.0 -0.2 -0.0 -0.0 N.D.
lb LB +0.8 -0.1 +0.1 +0.0 N.D.
carbon source L-Ornithine +0.8 +0.2 -0.1 +0.0 N.D.
stress Cisplatin 0.006 mg/ml +0.5 +0.4 +0.1 +0.0 N.D.
nitrogen source L-Glutamine (N) +0.7 +0.1 +0.1 +0.2 N.D.
carbon source L-Citrulline +0.8 +0.3 +0.0 -0.0 N.D.
carbon source D-Trehalose (C) +0.6 +0.3 +0.1 +0.3 N.D.
carbon source D-Glucose +1.1 -0.0 +0.1 +0.3 N.D.
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